|
| Status |
Public on Jun 26, 2017 |
| Title |
RNA-seq of ASXL2 shRNA KD in SKNO-1 cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The goals of this study are to compare transcriptome profiling (RNA-seq) of Asxl2 knockdowned SKNO-1 cells to control SKNO-1 cells. We found substantial number of genes are differentially expressed in Asxl2 knockdowned cells.
|
| |
|
| Overall design |
SKNO-1 mRNA profiles of ASXL2 knockdowned and control cells were generated by deep sequencing, two differrent shRNA for ASXL2, in triplicate.
|
| |
|
| Contributor(s) |
Sinha AU |
| Citation(s) |
28516957 |
| |
| Submission date |
Jul 13, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Omar Abdel-Wahab |
| E-mail(s) |
abdelwao@mskcc.org
|
| Organization name |
Memorial Sloan Kettering Cancer Center
|
| Department |
Medicine
|
| Lab |
Omar Abdel-Wahab Lab
|
| Street address |
1275 York Ave.
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (9)
|
|
| This SubSeries is part of SuperSeries: |
| GSE84365 |
RNA-seq and ChIP-seq data of ASXL1/2 in Hematopoiesis |
|
| Relations |
| BioProject |
PRJNA328992 |
| SRA |
SRP078442 |
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