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Status |
Public on Jun 26, 2017 |
Title |
RNA-seq and ChIP-seq data of ASXL1/2 in Hematopoiesis |
Organisms |
Homo sapiens; Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other
|
Summary |
This SuperSeries is composed of the SubSeries listed below.
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|
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Overall design |
Refer to individual Series
|
|
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Citation(s) |
28516957 |
|
Submission date |
Jul 13, 2016 |
Last update date |
May 15, 2019 |
Contact name |
Omar Abdel-Wahab |
E-mail(s) |
abdelwao@mskcc.org
|
Organization name |
Memorial Sloan Kettering Cancer Center
|
Department |
Medicine
|
Lab |
Omar Abdel-Wahab Lab
|
Street address |
1275 York Ave.
|
City |
New York |
State/province |
NY |
ZIP/Postal code |
10065 |
Country |
USA |
|
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Platforms (2) |
GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
Samples (54)
|
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This SuperSeries is composed of the following SubSeries:
|
GSE84357 |
RNA-seq of Asxl2 KO LSK cells |
GSE84358 |
RNA-seq of ASXL2 shRNA KD in SKNO-1 cells |
GSE84359 |
RNA-seq of primary patient AML samples |
GSE84361 |
ChIP-seq of H3K4me1 and H3K4me3 in SKNO1 cells after knockdown of ASXL2 |
GSE84362 |
ChIP-seq of H3K27me3 in SKNO1 cells after knockdown of ASXL2 |
GSE84363 |
ChIP-seq of ASXL2 in SKNO1 cells |
GSE84364 |
ATAC-seq of AML1-ETO9 leukemias |
GSE93164 |
ChIP-seq of H3K27Ac in SKNO1 cells after knockdown of ASXL2 |
GSE93165 |
ChIP-seq of H3K27me3 in Asxl1 or Asxl2 KO mice |
|
Relations |
BioProject |
PRJNA328983 |