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Series GSE84454 Query DataSets for GSE84454
Status Public on Feb 18, 2019
Title Effect of KCNK3 mutations on hypoxic mice lungs studied by RNASeq
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We sequenced RNA from lungs of mice, subjected to hypoxia, with or without KCNK3 knockout mutations
Overall design Comparison of hypoxic versus normoxic condition in the presence and absence of KCNK3 mutation
Contributor(s) West J
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Submission date Jul 15, 2016
Last update date May 15, 2019
Contact name James West
Organization name Vanderbilt University
Department Medicine
Lab Allergy, Pulmonary and Critical Care
Street address 4200 E 9TH Ave, Box B133
City Nashville
State/province TN
ZIP/Postal code 37201
Country USA
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (8)
GSM2236597 MSX1 NOR [3441-SG1]
GSM2236598 MSX1 NOR [3441-SG2]
GSM2236599 MSX1 HYP [3441-SG3]
BioProject PRJNA329218
SRA SRP078576

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84454_RAW.tar 2.3 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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