NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE85143 Query DataSets for GSE85143
Status Public on Feb 01, 2017
Title RNA-seq reveals changes in the astrocyte transcriptome following Borrelia burgdorferi infection
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary mRNA profiles of astrocytes infected with Borrelia burdorferi for 24 hours, 48 hours, and 24 hour uninfected controls were generated by deep sequencing, in triplicate, using Illumina HiSeq.
 
Overall design mRNA profiles of astrocytes infected with Borrelia burdorferi for 24 hours, 48 hours, and 24 hour uninfected controls were generated by deep sequencing, in triplicate, using Illumina HiSeq.
 
Contributor(s) Qureshi H, Peterson E, Perley D, Blake E, Jokinen B, Abbas A, Nechaev S, Watt J, Dhasarathy A, Brissette C
Citation(s) 28135303
Submission date Aug 03, 2016
Last update date May 15, 2019
Contact name Archana Dhasarathy
E-mail(s) archana.dhasarathy@med.und.edu
Organization name University of North Dakota
Street address 501 N Columbia Rd.
City Grand Forks
State/province North Dakota
ZIP/Postal code 58203
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (9)
GSM2258356 24h-1
GSM2258357 24h-2
GSM2258358 24h-3
This SubSeries is part of SuperSeries:
GSE85145 microRNA-seq and RNA-seq reveals changes in the astrocyte transcriptome following Borrelia burgdorferi infection
Relations
BioProject PRJNA336335
SRA SRP080859

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85143_RAW.tar 950.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap