NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE85420 Query DataSets for GSE85420
Status Public on Aug 10, 2019
Title Perinatal Exposure to 2,2’,4’4’ –Tetrabromodiphenyl Ether Impairs Male Reproductive Health in Adult Rats
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Toxicity of PBDE for male reproductive system was shown in several human and animal studies, however long lasting effects of perinatal exposures on male reproduction are yet poorly understood. In this study pregnant Wistar rats were exposed to 0.2 mg/kg 2,2’,4,4’-tetrabromodiphenyl ether (BDE-47) from gestation day 8 till postnatal day 21 and testis transcriptome was analyzed on postnatal day 120 in offspring. Exposed animals had significant change in testes transcriptome including suppression of genes essential for spermatogenesis and activation of immune response genes. In particular exposed animals had on average 4 fold decreased expression of protamine and transition protein genes in testes suggesting that histone-protamine exchange may be dysregulated in the course of spermatogenesis resulting in exposure legacy transfer to the next generation via aberrant sperm epigenome.
 
Overall design Rats were exposed perinataly to vehicle or BDE-47. Total RNA was extracted from testis of 5 control and 5 exposed animals on postnatal day 120 and sequenced with multiplexing on NextSeq500.
 
Contributor(s) Suvorov A
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 10, 2016
Last update date Aug 10, 2019
Contact name Alexander Suvorov
E-mail(s) asuvorov@schoolph.umass.edu
Organization name University of Massachusetts
Department Environmental Health Sciences
Street address 149A Goessman, 686 N.Pleasant Str
City Amherst
State/province MA
ZIP/Postal code 01003-9303
Country USA
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (10)
GSM2266531 BFR2_C2-2
GSM2266532 BFR2_C3-1
GSM2266533 BFR2_C4-2
Relations
BioProject PRJNA338429
SRA SRP081216

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85420_Processed_BFR2.xlsx 5.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap