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| Status |
Public on Feb 01, 2017 |
| Title |
Influence of green light on the transcriptome of Pseudomonas cichorii JBC1 |
| Organism |
Pseudomonas cichorii JBC1 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Pseudomonas cichorii JBC1 was cultured in LB media till it reached exponential phase and the bacterial cells were collected and resuspended in minimal media and treated under green light and dark condition for 12 hours at 30°C. After treatment, the RNA from each sample was collected and sequenced.
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| Overall design |
The experiment was conducted with 3 replicates under two different light conditions and the sample from the 3 replicates were pooled together and sequenced
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| Contributor(s) |
Lee YH, Rajalingam N, Park YS |
| Citation missing |
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| BioProject |
PRJNA338910 |
| |
| Submission date |
Aug 28, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Yong Hoon Lee |
| E-mail(s) |
yonghoonlee@jbnu.ac.kr
|
| Organization name |
Chonbuk National University
|
| Department |
Division of Biotechnology
|
| Lab |
Biocontrol Lab
|
| Street address |
79, Gobong-ro, Madong
|
| City |
Iksan-si |
| State/province |
Jeollabuk do |
| ZIP/Postal code |
54596 |
| Country |
South Korea |
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| Platforms (1) |
| GPL22374 |
Illumina HiSeq 2500 (Pseudomonas cichorii JBC1) |
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| Samples (2) |
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| Relations |
| SRA |
SRP082872 |
