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Series GSE87824 Query DataSets for GSE87824
Status Public on Jun 12, 2017
Title Systematic identification and comparison of expressed profiles of lncRNAs and circRNAs in male and female germline stem cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary Male and female germline stem cells are critical for passing genetic information from generation to generation. Accumulating evidences indicate that long noncoding RNAs (lncRNAs) and circular RNAs (circRNAs) play important roles in self-renewal and differentiation of germline stem cells. However, the mechanisms remain largely unknown. In this study, we explored the mRNAs, lncRNAs and circRNAs expression profiles of male and female germline stem cells through high-throughput sequencing.
Overall design mRNA, lncRNA and circRNA profiles of the mouse spermatogonial stem cells (SSCs) and female germline stem cells (FGSCs) by strand- specific RNA- seq
Contributor(s) Wu J, Li X
Citation(s) 28404936
Submission date Oct 11, 2016
Last update date May 15, 2019
Contact name Ji Wu
Organization name Shanghai Jiao Tong University
Street address No.800, Dongchuan Road, Minhang District
City Shanghai
ZIP/Postal code 200240
Country China
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM2341383 SSCs rep1
GSM2341384 SSCs rep2
GSM2341385 SSCs rep3
BioProject PRJNA347816
SRA SRP091381

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Supplementary file Size Download File type/resource
GSE87824_processed_data.xlsx 1.7 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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