NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE87851 Query DataSets for GSE87851
Status Public on Jun 12, 2017
Title Differential gene expression analysis of Wildtype and NMD deficient mutants grown at 23°C Long day condition
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary We sequenced mRNA of WT, upf1-5, upf3-1 and their double mutant seedlings grown at 23°C, day 8 after germination, ZT 16
 
Overall design Examination of mRNA level in WT and NMD deficient mutant seedling grown at 23°C
 
Contributor(s) Nasim Z, Fahim M, Lee J, Ahn J
Citation(s) 28261246
Submission date Oct 11, 2016
Last update date May 15, 2019
Contact name Zeeshan Nasim
E-mail(s) zeeshan_ibge@yahoo.com
Organization name Korea University
Department School of Life Sciences and Biotechnology
Street address Anam-ro 145, Seongbuk-Gu
City Seoul
ZIP/Postal code 136-713
Country South Korea
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (4)
GSM2341920 WT
GSM2341921 upf1-5
GSM2341922 upf3-1
Relations
BioProject PRJNA347858
SRA SRP091395

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87851_genes.sorted_by_fold.txt.gz 3.0 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap