GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE89207 Query DataSets for GSE89207
Status Public on Jan 01, 2017
Title Candidate Gene Identification Through RNA-Seq Analysis of (TRAMP x J:DO) F1 Primary Tumors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq analysis of 195 randomly selected (TRAMP x J:DO) F1 prostates that had been harvested at experimental termination (210 days or humane endpoints) was performed to identify metastasis associated transcriptomic changes
Overall design Total RNA expression profile of TRAMP x DO F1 prostate tumors
Contributor(s) Gildea DE, Crawford NP
Citation(s) 27916600
Submission date Oct 26, 2016
Last update date May 15, 2019
Contact name Jean Winter
Organization name NIH
Department NHGRI
Street address 50 South Driver
City Bethesda
State/province MD
ZIP/Postal code 20814
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (281)
GSM2360631 4006 RNA-seq
GSM2360632 5110 RNA-seq
GSM2360633 4360 RNA-seq
This SubSeries is part of SuperSeries:
GSE87491 Analysis of germline modifiers of aggressive prostate cancer using cross-species variation and systems genetics
BioProject PRJNA350679
SRA SRP092108

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89207_TgNegative_samples_TPM_counts.txt.gz 3.3 Mb (ftp)(http) TXT
GSE89207_TgNegative_samples_raw_counts.txt.gz 3.9 Mb (ftp)(http) TXT
GSE89207_TgPositive_samples_TPM_counts.txt.gz 8.5 Mb (ftp)(http) TXT
GSE89207_TgPositive_samples_raw_counts.txt.gz 9.4 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap