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Series GSE89261 Query DataSets for GSE89261
Status Public on Oct 28, 2016
Title Transcriptional response of small-intestinal lamina propria CD4+ T cells to bacterial colonization
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We analyzed the transcriptional profile of small-intestinal lamina propria (SI-LP) CD4+ T cells isolated from germ-free and mice monocolonized with Bifidobacterium adolescentis, SFB, and Nexabiotic (a 23-strain, Th17-inducing, probiotic mix).
Overall design CD4+ T cells were double-sorted from mice directly into lysis buffer.
Contributor(s) Tan TG, Geva-Zatorsky N, Sefik E, Kua L, Naskar D, Teng F, Pasman L, Ortiz-Lopez A, Jupp R, Wu HJ, Kasper DL, Benoist C, Mathis D
Citation(s) 27911839
Submission date Oct 27, 2016
Last update date May 15, 2019
Contact name CBDM Lab
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (12)
GSM2363308 Badolescentis#1
GSM2363309 Badolescentis#2
GSM2363310 Badolescentis#3
BioProject PRJNA350847
SRA SRP092209

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Supplementary file Size Download File type/resource
GSE89261_Gene_count_table.csv.gz 285.1 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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