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| Status |
Public on Nov 02, 2018 |
| Title |
Below ground attack by root knot nematode Meloidogyne graminicola predisposes rice to blast disease |
| Organism |
Oryza sativa Japonica Group |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Magnaporthe oryzae (rice blast) and the root-knot nematode Meloidogyne graminicola are causing two of the most important pathogenic diseases jeopardizing rice production. Here, we show that root-knot nematode infestation on rice roots leads to important above-ground changes in plant immunity gene expression, which is correlated with significantly enhanced susceptibility to blast disease.
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| Overall design |
Differential expression analysis between controls rice shoots and shoots from root knot nematode (M. graminicola) infected rice at two time points.
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| Contributor(s) |
Kyndt T, Zemene HY, Haeck A, Singh R, De Vleesschauwer D, Denil S, De Meyer T, Höfte M, Demeestere K, Gheysen G |
| Citation(s) |
28151048 |
| |
| Submission date |
Nov 02, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Jeroen Galle |
| Organization name |
Ghent University
|
| Department |
Dept. Of Mathematical Modelling, Statistics and Bioinformatics
|
| Lab |
Biobix, Lab of Bioinformatics and Computational Genomics
|
| Street address |
Coupure Links 653
|
| City |
Ghent |
| ZIP/Postal code |
9000 |
| Country |
Belgium |
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| Platforms (1) |
| GPL15370 |
Illumina Genome Analyzer IIx (Oryza sativa Japonica Group) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA352238 |
| SRA |
SRP092466 |
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