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Series GSE89805 Query DataSets for GSE89805
Status Public on Oct 03, 2017
Title Transcriptome analysis of annotated coding genes and sORF at 74 accessions of A. thaliana
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary We applied previously designed array in order to widely cover all types of genes of 74 A. thaliana accessions.
Overall design The 18-days-old seedlings of 74 accessions were growing on 1% agar plates containing Murashige and Skoog (MS). Aerial parts of seedling were processed in two biological duplicates in each accession.
Contributor(s) Shirai K, Matsuda F, Nakabayashi R, Okamoto M, Tanaka M, Fujimoto A, Shimizu M, Shinozaki K, Seki M, Saito K, Hanada K
Citation(s) 28961930
Submission date Nov 14, 2016
Last update date Oct 04, 2017
Contact name Kazumasa Shirai
Phone 0948-29-7842
Organization name Kyushu Institute of Technology
Department Frontier Research Academy for Young Researchers
Lab Hanada lab
Street address 680-4 Kawazu
City Iizuka
State/province Fukuoka
ZIP/Postal code 820-8502
Country Japan
Platforms (1)
GPL14937 Agilent-022830 RIKEN_AT_sORF0902
Samples (148)
GSM2389519 CS28890 Replicate 1
GSM2389520 CS28890 Replicate 2
GSM2389521 CS28917 Replicate 1
BioProject PRJNA353356

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89805_RAW.tar 916.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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