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| Status |
Public on Dec 10, 2016 |
| Title |
Structure and variation in microbiome from continuous and rotational Pinellia ternata cropping soils |
| Organisms |
uncultivated soil bacterium; Pinellia ternata |
| Experiment type |
Other
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| Summary |
We used wheat as rotational crop to assess the influence of continuous cropping on microbiome in Pinellia ternata rhizosphere and the remediation of rotational cropping to the impacted microbiota. Illumina high-throughput sequencing technology was utilized for this method to explore the rhizosphere microbial structure and diversity based on continuous and rotational cropping.
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| Overall design |
Greenhouse experiment was designed to reveal the difference in microbiome of rotational and continuous cropping soil; details provided in the readme.txt and supporting figure for experimental_design.pdf files.
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| Contributor(s) |
He Z, Dong J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Dec 09, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
zhigui he |
| E-mail(s) |
james1916@126.com
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| Phone |
008613384950020
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| Organization name |
Northwest A & F University, College of Life Sciences
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| Street address |
5
|
| City |
yangling |
| ZIP/Postal code |
712100 |
| Country |
China |
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| Platforms (2) |
| GPL22769 |
Illumina MiSeq (Pinellia ternata) |
| GPL22770 |
Illumina MiSeq (uncultivated soil bacterium) |
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| Samples (54)
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| Relations |
| BioProject |
PRJNA356841 |
| SRA |
SRP094832 |
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