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Series GSE94086 Query DataSets for GSE94086
Status Public on Jun 12, 2017
Title SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 28250819
NIH grant(s)
Grant ID Grant title Affiliation Name
K22 HL126842 Regulation of chromatin and genome stability by the H4K20 methyltransferase SMYD5 WAYNE STATE UNIVERSITY Benjamin L Kidder
Submission date Jan 26, 2017
Last update date May 15, 2019
Contact name Benjamin L Kidder
E-mail(s) benjamin.kidder@wayne.edu
Organization name Wayne State University
Department Oncology
Lab Laboratory of Epigenomics
Street address 4100 John R St
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (27)
GSM2467326 shLuc_H4K20me3_mESC
GSM2467327 shSmyd5_H4K20me3_mESC
GSM2467328 shLuc_Input_mESC (control for H4K20me3 ChIP)
This SuperSeries is composed of the following SubSeries:
GSE94033 SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [ChIP-Seq]
GSE94085 SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [RNA-Seq]
Relations
BioProject PRJNA368813

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94086_RAW.tar 876.3 Mb (http)(custom) TAR (of BEDGRAPH, RPKM)
SRA Run SelectorHelp

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