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Series GSE94647 Query DataSets for GSE94647
Status Public on Jul 26, 2018
Title Analysis of gene expression in populations of adult undifferentiated spermatogonia [microarray]
Organism Mus musculus
Experiment type Expression profiling by array
Summary The undifferentiated spermatogonial population of mouse testis is known to be functionally heterogeneous and contain both stem cells and committed progenitor cells. However, gene expression patterns marking these distinct cell fractions are poorly defined. We found that a subset of undifferentiated spermatogonia were marked by expression of an Oct4-GFP transgene but properties of these cells were unclear. Undifferentiated cells were therefore isolated from adult testes and seperated according to expression of Oct4-GFP for gene expression analysis by microarray. Our goal was to correlate Oct4-GFP expression with that of known markers of stem and committed progenitor cells to determine which undifferentiated cell populations were marked by Oct4-GFP.
 
Overall design 3 independent sets of Oct4-GFP-positive and Oct4-GFP-negative undifferentiated spermatogonia were isolated by flow sorting from adult mouse testes. To obtain sufficient cells for analysis, testis cells from 2-3 mice were pooled for each sample.
 
Contributor(s) Hobbs RM, La HM, Mäkelä J, Chan A, Rossello FJ, Nefzger CM, Legrand JM, De Seram M, Polo JM
Citation(s) 30026551
Submission date Feb 08, 2017
Last update date Jul 28, 2018
Contact name Robin Mark Hobbs
E-mail(s) robin.hobbs@monash.edu
Organization name Hudson Institute of Medical Research
Department Centre for Reproductive Health
Lab Germline Stem Cell Biology Laboratory
Street address 27-31 Wright Street
City CLAYTON
State/province VIC
ZIP/Postal code 3168
Country Australia
 
Platforms (1)
GPL13912 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)
Samples (6)
GSM2480245 Oct4-GFPpos spermatogonia rep 1
GSM2480246 Oct4-GFPneg spermatogonia rep 1
GSM2480247 Oct4-GFPpos spermatogonia rep 2
This SubSeries is part of SuperSeries:
GSE107256 Analysis of gene expression in populations of adult undifferentiated spermatogonia
Relations
BioProject PRJNA371727

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94647_RAW.tar 27.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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