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| Status |
Public on Mar 14, 2023 |
| Title |
Genome-wide analysis of miRNAs suggests a differential microRNAs signature associated with Normal and Diabetic limbal human corneas |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
Small non-coding RNAs, in particular microRNAs (miRNAs), regulate fine-tuning of gene expression and can impact a wide range of biological processes. Using deep sequencing analysis, we investigated miRNA expression profiles in central and limbal regions of normal and diabetic human corneas. We identified differentially expressed miRNAs in limbus vs. central cornea in normal and diabetic (DM) corneas including both type I (T1DM/IDDM) and type II (T2DM/NIDDM). Some miRNAs such as miR-10b that was upregulated in limbus vs. central corneas and in diabetic vs. normal limbus also showed significant increase in T1DM vs. T2DM limbus
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| Overall design |
To study differntial expresssion profile of miRNAs in Normal and diabetic limbus and central corneas.
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| Contributor(s) |
Kulkarni M, Leszczynska A, Wei G, Winkler M, Tang J, Funari VA, Deng N, Liu Z, Punj V, Deng SX, Ljubimov AV, Saghizadeh M |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Mar 27, 2017 |
| Last update date |
Mar 14, 2023 |
| Contact name |
Vasu Punj |
| E-mail(s) |
vasupunj@gmail.com
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| Organization name |
USC
|
| Street address |
Biggy Street
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90033 |
| Country |
USA |
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| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
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| Samples (44)
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| Relations |
| BioProject |
PRJNA380620 |
| SRA |
SRP102514 |
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