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Series GSE98093 Query DataSets for GSE98093
Status Public on Sep 28, 2017
Title GABPA ChIP-seq in human monocytic THP-1 cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq for GABPA in THP-1 cells after stimulation with the the natural VDR ligand 1,25-dihydroxyvitamin D3 (1,25(OH)2D3)
Overall design THP-1 cells were treated for 24 h with 100 nM 1,25(OH)2D3 or vehicle before ChIP assay
Contributor(s) Seuter S, Neme A, Carlberg C
Citation(s) 28870774
Submission date Apr 24, 2017
Last update date Jul 25, 2021
Contact name Carsten Carlberg
Organization name University of Eastern Finland
Department Institute of Biomedicine
Street address Yliopistonranta 1D
City Kuopio
ZIP/Postal code 70211
Country Finland
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM2587055 THP-1, GABPA 24 h EtOH
GSM2587056 THP-1, GABPA 24 h 1,25(OH)2D3
BioProject PRJNA383990
SRA SRP105057

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98093_RAW.tar 473.1 Mb (http)(custom) TAR (of TDF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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