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Sample GSM1006872 Query DataSets for GSM1006872
Status Public on Sep 20, 2012
Title UT-A_ChipSeq_Spleen_OC_Input
Sample type SRA
 
Source name Spleen_OC
Organism Homo sapiens
Characteristics datatype: ChipSeq
datatype description: Chromatin IP Sequencing
controlid: wgEncodeEH003455
labversion: fseq v 1.84
cell: Spleen_OC
cell organism: human
cell description: Primary frozen spleen tissue from NICHD donor IDs 1863 (Rep B1) and 4548 (Rep B2)
cell karyotype: normal
cell sex: F
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
controlid: wgEncodeEH003455
Biomaterial provider NICHD
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
 
Data processing http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
 
Submission date Sep 20, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9052
Series (1)
GSE33213 Open Chromatin TFBS by ChIP-seq from ENCODE/Open Chrom(UT Austin)
Relations
SRA SRX188949
BioSample SAMN01180298
Named Annotation GSM1006872_hg19_wgEncodeOpenChromChipSpleenocInputSig.bigWig

Supplementary file Size Download File type/resource
GSM1006872_hg19_wgEncodeOpenChromChipSpleenocInputSig.bigWig 4.2 Gb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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