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Sample GSM10419

Query DataSets for GSM10419

Status

Public on Nov 08, 2003

Title

Kidney glomerulus

Sample type

SAGE

Anchor

Sau3A

Tag Count

44334

Tag Length

Source name

microdissected glomeruli

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Library generated from microdissected kidney glomeruli obtained from the healthy pole of cancerous kidneys. Donors were from either sex. The library was generated using Sau3A I as anchoring enzyme. Data are provided after removal of linkers derived sequences
Keywords = microdissection
Keywords = nephron
Keywords = SADE

Submission date

Sep 23, 2003

Last update date

Nov 19, 2008

Contact name

Jean-Marc Elalouf

E-mail(s)

jean-marc.elalouf@cea.fr

Phone

(33) 1 69088022

Fax

(33) 1 69084712

Organization name

CEA Saclay

Department

IBITEC-S

Lab

Laboratoire de PhysioGénomique

Street address

City

91191 Gif/ Yvette Cedex

ZIP/Postal code

91191

Country

France

Platform ID

GPL6

Series (1)

GSE694

SADE analysis of microdissected kidney

Data table header descriptions
TAG	Tag sequence
COUNT	Tag abundance
TPM	tags per million

Data table
TAG	COUNT	TPM
ACACATCAAG	522	11774.26
AGACTCTGAA	277	6248.03
AGTTTTTTCA	212	4781.88
GCCGTTCTGG	210	4736.77
CCGGCCAGCC	209	4714.21
AGGAGGCATC	193	4353.32
ACGCCACTGC	191	4308.21
AAGTTTAAAT	189	4263.09
ACCTGGGTTT	187	4217.98
GCGCCACTGC	182	4105.20
GCACCACTGC	138	3112.74
TTTGTCTTTT	137	3090.18
TTTGTACGTA	125	2819.51
TACAATGAAG	119	2684.17
GCTTTCTACA	118	2661.61
ACCTGAGGTC	116	2616.50
AGCCATTAAA	108	2436.05
GGGTAGCTCA	106	2390.94
ACACCACTGC	97	2187.94
AAGTGACTTC	95	2142.82

Total number of rows: 20525

Table truncated, full table size 382 Kbytes.

Supplementary data files not provided