|
| Status |
Public on Jan 10, 2013 |
| Title |
meningiomas_351 |
| Sample type |
genomic |
| |
|
| Source name |
genomic DNA from meningiomas
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Male
tissue type: meningiomas
subtype: atypical
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted from meningiomas tissues using Qiagen DNeasy Kit according to standard instructions.
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol.
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
array identifier: 6929671097_R01C01
|
| Data processing |
BeadStudio software v3.2
|
| |
|
| Submission date |
Dec 12, 2012 |
| Last update date |
Jun 14, 2021 |
| Contact name |
Fan Gao |
| E-mail(s) |
gaofan83@hotmail.com
|
| Organization name |
USC
|
| Department |
ZNI
|
| Street address |
1501 San Pablo St. ZNI 245
|
| City |
Los Angeles |
| State/province |
California |
| ZIP/Postal code |
90033 |
| Country |
USA |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE42882 |
DNA methylation in the malignant transformation of meningiomas |
|
| Relations |
| Reanalyzed by |
GSE178139 |
