GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM108249
Query DataSets for GSM108249
Status
Public on Apr 30, 2007
Title
R42A
Sample type
RNA
Channel 1
Source name
breast tumor
Organism
Homo sapiens
Characteristics
breast tumor
Extracted molecule
total RNA
Label
Cy5
Channel 2
Source name
ref. RNA
Organism
Homo sapiens
Characteristics
Ref RNA
Extracted molecule
total RNA
Label
Cy3
Description
Biochem Biophys Res Comm 2006; 344: 1111-1120
Data processing
VSN normalised
Submission date
May 09, 2006
Last update date
Apr 30, 2007
Contact name
Mads Thomassen
E-mail(s)
mads.thomassen@ouh.fyns-amt.dk
Phone
+4565412839
Fax
+4565411911
Organization name
Odense University Hospital
Department
Clinical Genetics (KKA)
Street address
Soender Boulevard 9
City
Odense
ZIP/Postal code
DK-5000
Country
Denmark
Platform ID
GPL3733
Series (1)
GSE4796
Prediction of metastasis from low-malignant breast cancer by gene expression profiling
Data table header descriptions
ID_REF
VALUE
log2 of PRE_VALUE
PRE_VALUE
Cy5/Cy3
Data table
ID_REF
VALUE
PRE_VALUE
1
-0.9248
0.526751397
2
-0.3326
0.794116083
3
0.0055
1.003832851
4
0.3578
1.281429731
5
0.7200
1.647233449
6
0.4911
1.405532164
7
0.2318
1.174269522
8
0.4355
1.352337138
9
1.6868
3.219352812
10
0.0590
1.041711378
11
1.0879
2.125640808
12
-0.9096
0.532320653
13
0.5065
1.42058957
14
1.1494
2.218163594
15
0.2381
1.179443994
16
-0.4495
0.732276564
17
-0.1917
0.875593246
18
-0.1620
0.893774344
19
-0.1707
0.888437437
20
-0.1604
0.89479298
Total number of rows:
28931
Table truncated, full table size
704 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM108249.txt.gz
2.7 Mb
(ftp)
(http)
TXT
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|