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Sample GSM110 Query DataSets for GSM110
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-8, tumor 1 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=NA
died=NA
tumorsize.cm=10
sex=m
age=60
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180163 reuse=5 date=21-May-1999
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 6340 4900 1440
2 8621 4900 3721
3 3005 4900 -1895
4 7427 4900 2527
5 5739 4900 839
6 43066 4900 38166
7 4489 4900 -411
8 13608 4900 8708
9 12706 4900 7806
10 7387 4900 2487
11 7476 4900 2576
12 7045 4900 2145
13 3820 4900 -1080
14 5284 4900 384
15 4917 4900 17
16 4676 4900 -224
17 4119 4900 -781
18 4869 4900 -31
19 7221 4900 2321
20 3655 4900 -1245

Total number of rows: 36864

Table truncated, full table size 785 Kbytes.




Supplementary data files not provided

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