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Sample GSM114616 Query DataSets for GSM114616
Status Public on Jan 01, 2007
Title expression_8004#-XVM2_8004#-NYG_2
Sample type RNA
 
Channel 1
Source name strain 8004#-NYG
Organism Xanthomonas campestris pv. campestris
Characteristics 8004# strain,total RNA, harvested from the rich medium NYG
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name strain 8004#-XVM2
Organism Xanthomonas campestris pv. campestris
Characteristics 8004# strain,total RNA, harvested from the defined medium XVM2
Extracted molecule total RNA
Label Cy3
 
 
Description Comparativethe expression profiles profiling of bacteria harvested from the rich medium NYG and the defined medium XVM2
Data processing After background correction and removal of bad spots, expression ratio was linear normalized based on the gene XC3300
 
Submission date Jun 15, 2006
Last update date Jun 16, 2006
Contact name Liang Zhang
E-mail(s) lzhang@capitalbio.com
Organization name CapitalBio Corporation
Street address 18 Life Science Parkway,Changping District
City Beijing
ZIP/Postal code 102206
Country China
 
Platform ID GPL3842
Series (1)
GSE5087 CGH analysis between Xcc strains and transcriptome analysis of Xcc 8004 grown in NYG and XVM2

Data table header descriptions
ID_REF
VALUE Normalized ratio of expression defined as CH1 divided by CH2

Data table
ID_REF VALUE
1 0.8472867
2 0.7642868
3 0.5605793
4 6.277213
5 5.854891
6 6.863172
7 0.4747349
8 0.5955949
9 0.5561148
10 3.297486
11 3.32869
12 3.22404
13 1.253616
14 1.296929
15 1.42025
16 0.7240378
17 0.8545939
18 0.9992106
19 1.674098
20 1.659765

Total number of rows: 12768

Table truncated, full table size 181 Kbytes.




Supplementary file Size Download File type/resource
GSM114616.gpr.gz 1.1 Mb (ftp)(http) GPR

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