|
Status |
Public on May 10, 2004 |
Title |
GC2_CT18_3hr Mitomycin C gDNA_2d608_3 |
Sample type |
genomic |
|
|
Channel 1 |
Source name |
CT18 3hr Mitomycin C gDNA
|
Organism |
Salmonella enterica subsp. enterica serovar Typhi |
Extracted molecule |
genomic DNA |
|
|
Channel 2 |
Source name |
CT18 log gDNA
|
Organism |
Salmonella enterica subsp. enterica serovar Typhi |
Extracted molecule |
genomic DNA |
|
|
|
Description |
CT18 exposed to 2ug/mL of Mitomycin C for 3hrs copmared to untreated log phase CT18 gDNA. Treated samples labeled with Cy5. User - FBlackmer Date_of_Scan = Fri Jan 31 11:08:59 2003 Keywords = Salmonella
|
|
|
Submission date |
Oct 17, 2003 |
Last update date |
May 28, 2005 |
Contact name |
Michael McClelland |
E-mail(s) |
mcclelland.michael@gmail.com
|
Phone |
858-336-9554
|
Organization name |
University of California, Irvine
|
Department |
Microbiology & Molecular Genetics
|
Street address |
132 Med Surge I
|
City |
Irvine |
State/province |
CA |
ZIP/Postal code |
92697 |
Country |
USA |
|
|
Platform ID |
GPL224 |
Series (1) |
GSE812 |
CT18_MitomycinC_2ug/ml_DNA |
|
Data table header descriptions |
ID_REF |
Number |
X_LOCATION |
X-coordinate of spot |
Y_LOCATION |
Y-coordinate of spot |
CH1_MEAN |
Channel 1 mean |
CH1_BKD_MEAN |
Channel 1 mean background |
CH1_SD |
Channel 1 standard deviation |
CH1_BKD_SD |
Channel 1 background standard deviation |
CH1_DIAMETER |
Channel 1 diameter |
CH1_AREA |
Channel 1 area |
CH1_FOOTPRINT |
Channel 1 footprint |
CH1_CIRCULARITY |
Channel 1 circularity |
CH1_SPOT_UNIFORMITY |
Channel 1 spot uniformity |
CH1_BKD_UNIFORMITY |
Channel 1 background uniformity |
CH1_SIGNAL_NOISE_RATIO |
Channel 1 signal to noise ratio |
CH1_CONFIDENCE |
Channel 1 confidence |
CH2_MEAN |
Channel 2 mean |
CH2_BKD_MEAN |
Channel 2 mean background |
CH2_SD |
Channel 2 standard deviation |
CH2_BKD_SD |
Channel 2 background standard deviation |
CH2_DIAMETER |
Channel 2 diameter |
CH2_AREA |
Channel 2 area |
CH2_FOOTPRINT |
Channel 2 footprint |
CH2_CIRCULARITY |
Channel 2 circularity |
CH2_SPOT_UNIFORMITY |
Channel 2 spot uniformity |
CH2_BKD_UNIFORMITY |
Channel 2 background uniformity |
CH2_SIGNAL_NOISE_RATIO |
Channel 2 signal to noise ratio |
CH2_CONFIDENCE |
Channel 2 confidence |
CH1_DIAMETER_FILTER |
Channel 1 diameter filter |
CH1_AREA_FILTER |
Channel 1 area filter |
CH1_CIRCULARITY_FILTER |
Channel 1 circularity filter |
CH1_SPOT_UNIFORMITY_FILTER |
Channel 1 spot uniformity filter |
CH1_BKD_UNIFORMITY_FILTER |
Channel 1 background uniformity filter |
CH1_SIGNAL_NOISE_RATIO_FILTER |
Channel 1 signal to noise ratio filter |
CH2_DIAMETER_FILTER |
Channel 2 diameter filter |
CH2_AREA_FILTER |
Channel 2 area filter |
CH2_CIRCULARITY_FILTER |
Channel 2 circularity filter |
CH2_SPOT_UNIFORMITY_FILTER |
Channel 2 spot uniformity filter |
CH2_BKD_UNIFORMITY_FILTER |
Channel 2 background uniformity filter |
CH2_SIGNAL_NOISE_RATIO_FILTER |
Channel 2 signal to noise ratio filter |
IGNORE_FILTER |
Ignore filter |
CH1_BKD_CORR |
Channel 1 background correlation |
CH2_BKD_CORR |
Channel 2 background correlation |
CH1%_OF_TOTAL |
Channel 1 % of total |
CH2%_OF_TOTAL |
Channel 2 % of total |
PRE-VALUE |
ch1 % of total / ch2 % of total |
VALUE |
log of ch1 % of total / ch2 % of total |