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Sample GSM1215940 Query DataSets for GSM1215940
Status Public on Aug 28, 2013
Title Adult mouse cardiac mesenchymal progenitor from Ventricle, Living
Sample type RNA
 
Source name mCMP_V_Living
Organism Mus musculus
Characteristics strain background: C57BL/6
tissue source: ventricle_living
cell type: mouse cardiac mesenchymal progenitor (mCMP)
Growth protocol CMPs were cultured on Collagen I coated dish in DMEM/F12 supplemented with 10% FBS, 40 ng/ml bFGF.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from each samples using the RNeasy Plus Mini Kit (QIAGEN).
Label Cy3
Label protocol 250 ng of total RNA was labelled with Cy3 using the Low RNA Fluorecent Linear Amplification Kit PLUS, One-Color (Agilent Technologies) according to the manufacturer's instructions.
 
Hybridization protocol Hybridization and washing steps were using Gene Expression Wash Pack (Agilent Technology) according to the manufacturer's instructions.
Scan protocol Fluorescence signals of the hybridized Agilent Microarrays were detected using DNA MicroArray Scanner (Agilent Technologies).
Description 4-Adult mouse cardiac mesenchymal progenitor from Ventricle, Living.txt
Data processing The scanned images were analyzed with Agilent Feature Extraction Software version 9.5.3 and further analyzed using GeneSpring GX software version 11.0.2. Data were normalized to the 75 th percentile (median).
 
Submission date Aug 27, 2013
Last update date Aug 28, 2013
Contact name Satoshi Gojo
E-mail(s) gojos@koto.kpu-m.ac.jp
Phone +81-75-251-5511
Organization name Kyoto Prefectural University of Medicine
Street address 465 Kajii-cho, Kamigyo-ku
City Kyoto
ZIP/Postal code 602-8566
Country Japan
 
Platform ID GPL10787
Series (1)
GSE50221 Cardiac mesenchymal progenitors from postmortem cardiac tissue retained cellular characterization

Data table header descriptions
ID_REF
VALUE Log2 normalized signal intensity.

Data table
ID_REF VALUE
A_55_P2051983 -6.02598
A_52_P169082 -2.976923
A_30_P01028193 -6.017187
A_52_P237997 -6.0132704
A_51_P414243 3.2040386
A_55_P2136348 -6.007025
A_51_P108228 -5.8895254
A_30_P01033363 -4.1031446
A_55_P2049737 -6.0003395
A_30_P01024440 -0.412858
A_30_P01025554 4.9995747
A_30_P01031558 -5.9968963
A_30_P01030675 -5.996366
A_51_P328014 2.3914623
A_30_P01019108 -1.8178535
A_55_P2056220 2.7287827
A_55_P1985764 4.910116
A_52_P108321 -1.0203185
A_55_P2018002 -0.7708173
A_52_P123354 2.1257172

Total number of rows: 55681

Table truncated, full table size 1329 Kbytes.




Supplementary file Size Download File type/resource
GSM1215940_4-Adult_mouse_cardiac_mesenchymal_progenitor_from_Ventricle__Living.txt.gz 11.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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