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Sample GSM1215941 Query DataSets for GSM1215941
Status Public on Aug 28, 2013
Title Adult mouse total heart RNA_Clontech
Sample type RNA
 
Source name Adult mouse heart
Organism Mus musculus
Characteristics tissue: Cardiac tissue
Growth protocol CMPs were cultured on Collagen I coated dish in DMEM/F12 supplemented with 10% FBS, 40 ng/ml bFGF.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from each samples using the RNeasy Plus Mini Kit (QIAGEN).
Label Cy3
Label protocol 250 ng of total RNA was labelled with Cy3 using the Low RNA Fluorecent Linear Amplification Kit PLUS, One-Color (Agilent Technologies) according to the manufacturer's instructions.
 
Hybridization protocol Hybridization and washing steps were using Gene Expression Wash Pack (Agilent Technology) according to the manufacturer's instructions.
Scan protocol Fluorescence signals of the hybridized Agilent Microarrays were detected using DNA MicroArray Scanner (Agilent Technologies).
Description 5-Adult mouse total heart RNA_Clontech.txt
Data processing The scanned images were analyzed with Agilent Feature Extraction Software version 9.5.3 and further analyzed using GeneSpring GX software version 11.0.2. Data were normalized to the 75 th percentile (median).
 
Submission date Aug 27, 2013
Last update date Aug 28, 2013
Contact name Satoshi Gojo
E-mail(s) gojos@koto.kpu-m.ac.jp
Phone +81-75-251-5511
Organization name Kyoto Prefectural University of Medicine
Street address 465 Kajii-cho, Kamigyo-ku
City Kyoto
ZIP/Postal code 602-8566
Country Japan
 
Platform ID GPL10787
Series (1)
GSE50221 Cardiac mesenchymal progenitors from postmortem cardiac tissue retained cellular characterization

Data table header descriptions
ID_REF
VALUE Log2 normalized signal intensity.

Data table
ID_REF VALUE
A_55_P2051983 -5.2695694
A_52_P169082 -2.45816
A_30_P01028193 -5.260748
A_52_P237997 -5.257327
A_51_P414243 3.9342937
A_55_P2136348 -5.2518272
A_51_P108228 -5.4643373
A_30_P01033363 -5.2484236
A_55_P2049737 -5.2473574
A_30_P01024440 -1.6039624
A_30_P01025554 3.382783
A_30_P01031558 -5.246665
A_30_P01030675 -5.2473
A_51_P328014 3.2300396
A_30_P01019108 -2.0441241
A_55_P2056220 1.3951254
A_55_P1985764 6.8157787
A_52_P108321 -1.0790863
A_55_P2018002 -1.6696129
A_52_P123354 2.2103071

Total number of rows: 55681

Table truncated, full table size 1330 Kbytes.




Supplementary file Size Download File type/resource
GSM1215941_5-Adult_mouse_total_heart_RNA_Clontech.txt.gz 11.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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