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Sample GSM1215942 Query DataSets for GSM1215942
Status Public on Aug 28, 2013
Title Fetal mHeat-WT_E16.5_B6
Sample type RNA
 
Source name fetal mouse heart
Organism Mus musculus
Characteristics strain background: C57BL/6
genotype/variation: wild type
age: embryonic day 16.5
tissue: Cardiac tissue
Growth protocol CMPs were cultured on Collagen I coated dish in DMEM/F12 supplemented with 10% FBS, 40 ng/ml bFGF.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from each samples using the RNeasy Plus Mini Kit (QIAGEN).
Label Cy3
Label protocol 250 ng of total RNA was labelled with Cy3 using the Low RNA Fluorecent Linear Amplification Kit PLUS, One-Color (Agilent Technologies) according to the manufacturer's instructions.
 
Hybridization protocol Hybridization and washing steps were using Gene Expression Wash Pack (Agilent Technology) according to the manufacturer's instructions.
Scan protocol Fluorescence signals of the hybridized Agilent Microarrays were detected using DNA MicroArray Scanner (Agilent Technologies).
Description 6-Fetal mHeat-WT_E16.5_B6.txt
Data processing The scanned images were analyzed with Agilent Feature Extraction Software version 9.5.3 and further analyzed using GeneSpring GX software version 11.0.2. Data were normalized to the 75 th percentile (median).
 
Submission date Aug 27, 2013
Last update date Aug 28, 2013
Contact name Satoshi Gojo
E-mail(s) gojos@koto.kpu-m.ac.jp
Phone +81-75-251-5511
Organization name Kyoto Prefectural University of Medicine
Street address 465 Kajii-cho, Kamigyo-ku
City Kyoto
ZIP/Postal code 602-8566
Country Japan
 
Platform ID GPL10787
Series (1)
GSE50221 Cardiac mesenchymal progenitors from postmortem cardiac tissue retained cellular characterization

Data table header descriptions
ID_REF
VALUE Log2 normalized signal intensity.

Data table
ID_REF VALUE
A_55_P2051983 -6.585974
A_52_P169082 -2.422399
A_30_P01028193 -6.57848
A_52_P237997 -6.575477
A_51_P414243 3.2743177
A_55_P2136348 -6.5708055
A_51_P108228 -6.6050854
A_30_P01033363 -3.1967583
A_55_P2049737 -2.818142
A_30_P01024440 -0.6485319
A_30_P01025554 3.836465
A_30_P01031558 -6.5665035
A_30_P01030675 -6.5670652
A_51_P328014 3.0482082
A_30_P01019108 -2.2399411
A_55_P2056220 2.2893467
A_55_P1985764 6.7655573
A_52_P108321 -0.88334036
A_55_P2018002 0.45496368
A_52_P123354 1.1208248

Total number of rows: 55681

Table truncated, full table size 1329 Kbytes.




Supplementary file Size Download File type/resource
GSM1215942_6-Fetal_mHeat-WT_E16.5_B6.txt.gz 11.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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