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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Oct 01, 2006 |
| Title |
F-IIP(NSIP)1_Cy3 |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
Lung, Familial Idiopathic Interstitial Pneumonia (F-IIP), Nonspecific Interstitial Pneumonia (NSIP)
|
| Organism |
Homo sapiens |
| Characteristics |
Tissue: lung
|
| Extracted molecule |
total RNA |
| Label |
Cy3
|
| |
|
| Channel 2 |
| Source name |
Universal Human Reference RNA (UHRR)
|
| Organism |
Homo sapiens |
| Characteristics |
Manufacturer: Stratagene
Catalog number: 740000
|
| Extracted molecule |
total RNA |
| Label |
Cy5
|
| |
|
| |
| Description |
Labeling, hybridization, and scanning done using Agilent reagents, hardware, and protocols
|
| Data processing |
Lowess normalization in Feature Extraction
|
| |
|
| Submission date |
Sep 01, 2006 |
| Last update date |
Sep 07, 2006 |
| Contact name |
Ivana V Yang |
| E-mail(s) |
yangi@njhealth.org
|
| Phone |
303-270-2589
|
| Fax |
303-270-2136
|
| Organization name |
National Jewish Health
|
| Department |
Medicine
|
| Street address |
1400 Jackson Street
|
| City |
Denver |
| State/province |
CO |
| ZIP/Postal code |
80206 |
| Country |
USA |
| |
|
| Platform ID |
GPL4255 |
| Series (1) |
| GSE5774 |
Gene Expression Profiling of Familial and Sporadic Cases of Interstitial Pneumonia |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
log-base2 ratio of sample over reference RNA |
| Cy3_SIG |
Cy3 signal reported as gDyeNormSignal by Agilent Feature Extraction Version 7.5.1 |
| Cy5_SIG |
Cy5 signal reported as rDyeNormSignal by Agilent Feature Extraction Version 7.5.1 |
| Data table |
| ID_REF |
VALUE |
Cy3_SIG |
Cy5_SIG |
| 1 |
2.154984756 |
11667.6 |
2619.79 |
| 2 |
null |
0 |
0 |
| 3 |
-0.421790258 |
2271.6 |
3043.01 |
| 4 |
0.052811284 |
427.219 |
411.863 |
| 5 |
-0.154063895 |
477.873 |
531.729 |
| 6 |
0.118156962 |
1474.26 |
1358.33 |
| 7 |
null |
0 |
0 |
| 8 |
null |
0 |
0 |
| 9 |
0.36305562 |
661.441 |
514.281 |
| 10 |
0.126243693 |
694.387 |
636.207 |
| 11 |
0.936941799 |
494.204 |
258.142 |
| 12 |
1.019879275 |
758.727 |
374.172 |
| 13 |
-0.321992939 |
133.49 |
166.87 |
| 14 |
null |
0 |
0 |
| 15 |
-0.538768298 |
15137 |
21990 |
| 16 |
1.626607756 |
785.91 |
254.516 |
| 17 |
0.743014396 |
599.197 |
358.014 |
| 18 |
0.043738343 |
1962.35 |
1903.75 |
| 19 |
-0.345103753 |
555.235 |
705.283 |
| 20 |
null |
0 |
0 |
Total number of rows: 43606
Table truncated, full table size 1319 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM133542.txt.gz |
9.9 Mb |
(ftp)(http) |
TXT |
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