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Status |
Public on Oct 01, 2006 |
Title |
F-IIP(NSIP)1_Cy5 |
Sample type |
RNA |
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Channel 1 |
Source name |
Universal Human Reference RNA (UHRR)
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Organism |
Homo sapiens |
Characteristics |
Manufacturer: Stratagene; Catalog number: 740000
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Extracted molecule |
total RNA |
Label |
Cy3
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Channel 2 |
Source name |
Lung, Familial Idiopathic Interstitial Pneumonia (F-IIP), Nonspecific Interstitial Pneumonia (NSIP)
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Organism |
Homo sapiens |
Characteristics |
Tissue: lung
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Extracted molecule |
total RNA |
Label |
Cy5
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Description |
Labeling, hybridization, and scanning done using Agilent reagents, hardware, and protocols
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Data processing |
Lowess normalization in Feature Extraction
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Submission date |
Sep 01, 2006 |
Last update date |
Sep 07, 2006 |
Contact name |
Ivana V Yang |
E-mail(s) |
yangi@njhealth.org
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Phone |
303-270-2589
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Fax |
303-270-2136
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Organization name |
National Jewish Health
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Department |
Medicine
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Street address |
1400 Jackson Street
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City |
Denver |
State/province |
CO |
ZIP/Postal code |
80206 |
Country |
USA |
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Platform ID |
GPL4255 |
Series (1) |
GSE5774 |
Gene Expression Profiling of Familial and Sporadic Cases of Interstitial Pneumonia |
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Data table header descriptions |
ID_REF |
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VALUE |
log-base2 ratio of sample over reference RNA |
Cy3_SIG |
Cy3 signal reported as gDyeNormSignal by Agilent Feature Extraction Version 7.5.1 |
Cy5_SIG |
Cy5 signal reported as rDyeNormSignal by Agilent Feature Extraction Version 7.5.1 |
Data table |
ID_REF |
VALUE |
Cy3_SIG |
Cy5_SIG |
1 |
null |
0 |
0 |
2 |
null |
0 |
0 |
3 |
null |
0 |
0 |
4 |
null |
0 |
0 |
5 |
null |
0 |
0 |
6 |
0.230756785 |
1697.95 |
1992.46 |
7 |
null |
0 |
0 |
8 |
null |
0 |
0 |
9 |
null |
0 |
0 |
10 |
null |
0 |
0 |
11 |
null |
0 |
0 |
12 |
null |
0 |
0 |
13 |
null |
0 |
0 |
14 |
-3.826355493 |
4752.12 |
334.996 |
15 |
-0.616227072 |
29653.2 |
19345 |
16 |
null |
0 |
0 |
17 |
null |
0 |
0 |
18 |
null |
0 |
0 |
19 |
0.043815904 |
863.093 |
889.708 |
20 |
null |
0 |
0 |
Total number of rows: 43606
Table truncated, full table size 1290 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GSM133544.txt.gz |
10.0 Mb |
(ftp)(http) |
TXT |
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