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Sample GSM133857 Query DataSets for GSM133857
Status Public on Jan 08, 2007
Title Newbury_1-24_Petraea-highZn-leaves(PLH)_Rep3_ATH1
Sample type RNA
Source name petraea
Organism Arabidopsis lyrata subsp. petraea
Characteristics Developmental stage: 10-16 rosette leaves
Tissue: Rosette leaves
Treatment protocol 25um Zinc
Extracted molecule total RNA
Label biotin
Description location: Growth Room
Atmosphere: Normal
Humidity: 80
Temperature: 25
Lighting: 10hrs
Medium: Full mineral medium
Water: weekly
Data processing The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
Submission date Sep 01, 2006
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
Platform ID GPL198
Series (1)
GSE5738 Molecular bases of zinc tolerance and accumulation by Arabidopsis halleri
Reanalyzed by GSE118579
Reanalyzed by GSE119083

Data table header descriptions
VALUE This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE A p-value indicating the significance of the Detection call

Data table
AFFX-r2-P1-cre-5_at 8.58550000000000E+003 P 2.44000000000000E-004
AFFX-r2-P1-cre-3_at 9.81080000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioD-5_at 1.57810000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioD-3_at 1.99480000000000E+003 P 2.44000000000000E-004
AFFX-r2-Ec-bioC-5_at 4.49200000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioC-3_at 6.25600000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-M_at 2.16600000000000E+002 P 7.32000000000000E-004
AFFX-r2-Ec-bioB-5_at 1.51000000000000E+002 P 2.44000000000000E-004
AFFX-r2-Ec-bioB-3_at 1.79800000000000E+002 P 1.95300000000000E-003
AFFX-r2-Bs-thr-M_s_at 3.02000000000000E+001 A 5.67627000000000E-001
AFFX-r2-Bs-thr-5_s_at 5.31000000000000E+001 P 3.75980000000000E-002
AFFX-r2-Bs-thr-3_s_at 1.36000000000000E+001 A 6.65527000000000E-001
AFFX-r2-Bs-phe-M_at 7.50000000000000E+000 A 6.65527000000000E-001
AFFX-r2-Bs-phe-5_at 2.00000000000000E+000 A 7.80518000000000E-001
AFFX-r2-Bs-phe-3_at 1.17000000000000E+001 A 4.66064000000000E-001
AFFX-r2-Bs-lys-M_at 3.30000000000000E+000 A 5.67627000000000E-001
AFFX-r2-Bs-lys-5_at 1.10000000000000E+000 A 9.04785000000000E-001
AFFX-r2-Bs-lys-3_at 2.96000000000000E+001 A 1.49658000000000E-001
AFFX-r2-Bs-dap-M_at 2.00000000000000E+000 A 7.80518000000000E-001
AFFX-r2-Bs-dap-5_at 3.00000000000000E+000 A 9.69727000000000E-001

Total number of rows: 22810

Table truncated, full table size 1250 Kbytes.

Supplementary file Size Download File type/resource
GSM133857.CEL.gz 3.4 Mb (ftp)(http) CEL

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