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GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Oct 01, 2006 |
| Title |
S-IIP(UIP)3_Cy3 |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
Lung, Sporadic Idiopathic Interstitial Pneumonia (S-IIP), Usual Interstitial Pneumonia (UIP)
|
| Organism |
Homo sapiens |
| Characteristics |
Tissue: lung
|
| Extracted molecule |
total RNA |
| Label |
Cy3
|
| |
|
| Channel 2 |
| Source name |
Universal Human Reference RNA (UHRR)
|
| Organism |
Homo sapiens |
| Characteristics |
Manufacturer: Stratagene;
Catalog number: 740000
|
| Extracted molecule |
total RNA |
| Label |
Cy5
|
| |
|
| |
| Description |
Labeling, hybridization, and scanning done using Agilent reagents, hardware, and protocols
|
| Data processing |
Lowess normalization in Feature Extraction
|
| |
|
| Submission date |
Sep 05, 2006 |
| Last update date |
Sep 07, 2006 |
| Contact name |
Ivana V Yang |
| E-mail(s) |
yangi@njhealth.org
|
| Phone |
303-270-2589
|
| Fax |
303-270-2136
|
| Organization name |
National Jewish Health
|
| Department |
Medicine
|
| Street address |
1400 Jackson Street
|
| City |
Denver |
| State/province |
CO |
| ZIP/Postal code |
80206 |
| Country |
USA |
| |
|
| Platform ID |
GPL4255 |
| Series (1) |
| GSE5774 |
Gene Expression Profiling of Familial and Sporadic Cases of Interstitial Pneumonia |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
log-base2 ratio of sample over reference RNA |
| Cy3_SIG |
Cy3 signal reported as gDyeNormSignal by Agilent Feature Extraction Version 7.5.1 |
| Cy5_SIG |
Cy5 signal reported as rDyeNormSignal by Agilent Feature Extraction Version 7.5.1 |
| Data table |
| ID_REF |
VALUE |
Cy3_SIG |
Cy5_SIG |
| 1 |
4.197918357 |
29875.4 |
1627.85 |
| 2 |
null |
0 |
0 |
| 3 |
0.097210972 |
2182.73 |
2040.5 |
| 4 |
0.098353921 |
442.188 |
413.047 |
| 5 |
0.883253106 |
875.329 |
474.554 |
| 6 |
0.416970507 |
1665.47 |
1247.43 |
| 7 |
null |
0 |
0 |
| 8 |
null |
0 |
0 |
| 9 |
0.053716265 |
487.159 |
469.354 |
| 10 |
0.604580119 |
1019.15 |
670.257 |
| 11 |
null |
0 |
0 |
| 12 |
null |
0 |
0 |
| 13 |
0.90761207 |
307.273 |
163.797 |
| 14 |
7.358360115 |
25736.5 |
156.842 |
| 15 |
null |
0 |
0 |
| 16 |
1.626597563 |
646.365 |
209.326 |
| 17 |
2.035119384 |
1250.53 |
305.114 |
| 18 |
0.411519573 |
1916.92 |
1441.2 |
| 19 |
null |
0 |
0 |
| 20 |
null |
0 |
0 |
Total number of rows: 43606
Table truncated, full table size 1177 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM134594.txt.gz |
10.0 Mb |
(ftp)(http) |
TXT |
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