|
| Status |
Public on Oct 01, 2014 |
| Title |
51104.LMP |
| Sample type |
RNA |
| |
|
| Source name |
microdissected ovarian tumor
|
| Organism |
Homo sapiens |
| Characteristics |
patient: 51104
disease state: LGSC
component: Borderline
|
| Treatment protocol |
NA
|
| Growth protocol |
NA
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted from tumor cells using the AbsolutelyRNA microprep kit (Stratagene, Agilent Technologies, Santa Clara, CA, USA)
|
| Label |
biotin
|
| Label protocol |
Affymetrix GeneChip® WT Terminal Labelling and Hybridization was performed according to the manufacturer’s protocol
|
| |
|
| Hybridization protocol |
Hybridization was performed according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA).
|
| Scan protocol |
Arrays were washed using an Affymetrix fluidics stations and scanned using the Gene Chip Scanner 3000
|
| Description |
Sample name: 5899_SBT
AlternateIDRawData: 51104.LMP
|
| Data processing |
CEL files were produced using the Affymetrix® GeneChip® Command Console® Software (AGCC)
|
| |
|
| Submission date |
Apr 02, 2014 |
| Last update date |
Oct 01, 2014 |
| Contact name |
Dariush Etemadmoghadam |
| E-mail(s) |
dariush.etemadmoghadam@petermac.org
|
| Phone |
61396561149
|
| Organization name |
Peter MacCallum Cancer Centre
|
| Street address |
St Andrew's Place
|
| City |
East Melbourne |
| ZIP/Postal code |
3002 |
| Country |
Australia |
| |
|
| Platform ID |
GPL6244 |
| Series (2) |
| GSE56443 |
Genomic analysis of low-grade serous ovarian carcinomas [EXP] |
| GSE57280 |
Genomic analysis of low-grade serous ovarian carcinomas |
|
