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Sample GSM137734 Query DataSets for GSM137734
Status Public on Oct 03, 2006
Title HI-2
Sample type RNA
 
Source name experimental group: induced ovulation
Organism Oncorhynchus mykiss
Characteristics female: 7118
year: 2004
experimental group: induced ovulation
normalYSR-eyed-malfo: 19,69-47-17,39
% of eyed embryos (190degrees.day): 47
% of malfomations at YSR (550degrees.day): 17.4
% of normal alevins at YSR (550degrees.day): 19.7
Extracted molecule total RNA
Label P33
 
Description unfertilized eggs, autumn-spawning strain
Data processing The signal was normalized by the mean signal of the array
 
Submission date Sep 28, 2006
Last update date Oct 02, 2006
Contact name Julien Bobe
E-mail(s) Julien.Bobe@rennes.inra.fr
Phone (33) 2 23 48 57 24
Organization name Institut National de la Recherche Agronomique
Lab INRA-SCRIBE
Street address Campus de Beaulieu
City Rennes
ZIP/Postal code 35000
Country France
 
Platform ID GPL3650
Series (1)
GSE5928 Egg quality after natural and controlled ovulation

Data table header descriptions
ID_REF
VALUE mandatory...image signal intensity constant diameter
QIM_CONST image signal intensity constant diameter
QFIT_VAR fit signal intensity varariable diameter
FIT_CORR fot correction
QIM_VAR image signal intensity variable diameter
QFIT_CONST fit signal intensity constant diameter
DIAM variable diameter
SPOT_QUAL spot quality
OVER_CORR overshining correction
QM quality measure

Data table
ID_REF VALUE QIM_CONST QFIT_VAR FIT_CORR QIM_VAR QFIT_CONST DIAM SPOT_QUAL OVER_CORR QM
tcbk0048.l.08 0.4081 56.3418 69.7515 0.00174978 76.4016 48.4846 0 0.851865 0
tcbk0023.n.15 0.9833 73.5108 68.986 0.00266051 69.2646 74.1975 0 0.88326 0
tcbi0010.o.09 1.0232 117.364 125.65 0.00126874 125.754 116.882 0 0.914915 0
tcba0006.c.15 1.1172 104.691 83.6412 0.00201889 85.7652 104.993 0 0.90938 0
tcay0024.j.14 1.8395 160.158 168.45 0.000560573 170.134 157.855 1 0.911397 0
tcay0002.m.19 0.8297 99.586 94.0389 0.00154045 95.0946 99.5171 0 0.894874 0
tcac0006.k.10 1.8530 193.444 184.223 0.00114679 184.519 193.301 1 0.904535 0
1RT152N02_D_G01 1.9429 169.787 138.6 0.00172032 140.178 169.509 1 0.917016 0
1RT118G08_C_D04 2.3411 179.547 86.5468 0.00174978 121.051 128.531 1 0.828489 0
1RT85F03_B_C02 2.0787 64.218 45.1632 0.00186898 45.7505 63.8351 0 0.898246 0
1RT55O11_A_H06 0.8619 55.9692 23.2462 0.00270497 23.3775 57.2469 0 0.87301 0
CVU03687 14.8250 334.844 362.662 -0.000491397 360.921 335.332 1 0.87957 0
tcbk0048.l.15 0.3917 55.8677 66.2105 0.00174978 81.9602 45.1873 0 0.834061 0
tcbk0023.o.12 4.8445 364.009 35.0584 0.00174978 65.6965 101.81 1 0.437123 0
tcbi0010.o.16 0.4454 53.0119 17.5825 0.00250786 17.9933 53.5149 0 0.87895 0
tcba0006.d.08 0.5195 49.812 67.4044 0.00174978 76.08 46.7936 0 0.85371 0
tcay0024.k.20 0.7424 63.3693 74.5708 0.001465 74.2979 63.1885 0 0.895747 0
tcay0002.n.01 0.4090 26.6592 0 0.00174978 0 33.7665 0 0.809411 0
tcac0006.k.23 0.9879 92.4482 74.3518 0.00153938 75.0495 92.7345 0 0.894521 0
1RT152O08_C_H04 1.4802 74.9898 41.0454 0.00262948 41.6027 75.1268 0 0.893101 0

Total number of rows: 9216

Table truncated, full table size 688 Kbytes.




Supplementary data files not provided
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