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Sample GSM137736 Query DataSets for GSM137736
Status Public on Oct 03, 2006
Title PM14
Sample type RNA
 
Source name experimental group: photoperiod-advanced ovulation
Organism Oncorhynchus mykiss
Characteristics female: 43
year: 2003
experimental group: photoperiod-advanced ovulation
normalYSR-eyed-malfo: 93,8-99-2,78
% of eyed embryos (190degrees.day): 99
% of malfomations at YSR (550degrees.day): 2.8
% of normal alevins at YSR (550degrees.day): 93.8
Extracted molecule total RNA
Label P33
 
Description unfertilized eggs, autumn-spawning strain
Data processing The signal was normalized by the mean signal of the array
 
Submission date Sep 28, 2006
Last update date Oct 02, 2006
Contact name Julien Bobe
E-mail(s) Julien.Bobe@rennes.inra.fr
Phone (33) 2 23 48 57 24
Organization name Institut National de la Recherche Agronomique
Lab INRA-SCRIBE
Street address Campus de Beaulieu
City Rennes
ZIP/Postal code 35000
Country France
 
Platform ID GPL3650
Series (1)
GSE5928 Egg quality after natural and controlled ovulation

Data table header descriptions
ID_REF
VALUE mandatory...image signal intensity constant diameter
QIM_CONST image signal intensity constant diameter
QFIT_VAR fit signal intensity varariable diameter
FIT_CORR fot correction
QIM_VAR image signal intensity variable diameter
QFIT_CONST fit signal intensity constant diameter
DIAM variable diameter
SPOT_QUAL spot quality
OVER_CORR overshining correction
QM quality measure

Data table
ID_REF VALUE QIM_CONST QFIT_VAR FIT_CORR QIM_VAR QFIT_CONST DIAM SPOT_QUAL OVER_CORR QM
tcba0006.d.08 0.8513 58.8696 74.2254 0.00184865 92.7052 50.3741 0 0.847076 0
tcay0024.k.20 1.5663 107.274 108.066 0.00252935 107.274 108.066 0 0.910891 0
tcay0002.n.01 1.1204 58.0536 13.8684 0.00284885 14.323 58.5509 0 0.878288 0
tcac0006.k.23 1.5764 127.152 99.7076 0.0028438 100.975 126.37 0 0.926455 0
1RT152O08_C_H04 2.3970 90.8176 45.9331 0.00386141 47.1742 90.6613 0 0.905112 0
1RT118H04_D_D02 0.8443 60.1641 104.325 0.00184865 90.1598 73.8119 0 0.849915 0
1RT85G09_A_D05 1.5208 107.523 76.7291 0.00324171 76.0071 109.042 0 0.916135 0
1RT55O20_C_H10 3.5798 205.143 165.635 0.00301168 166.906 204.769 1 0.942897 0
CVU03687 0 212.475 172.414 0.00243041 171.972 211.795 1 0.914314 0
tcbk0048.l.18 0.9231 57.6105 70.3587 0.00184865 81.2377 48.1939 0 0.84345 0
tcbk0023.o.24 2.6786 127.298 128.064 0.00213571 127.298 128.064 0 0.929445 0
tcbi0010.p.08 1.1453 133.062 72.1976 0.00481598 75.1219 134.05 0 0.925988 0
tcba0006.g.01 5.0776 519.222 549.209 -0.00120488 548.131 518.293 1 0.954013 0
tcay0024.k.24 1.3459 78.9675 36.1175 0.00320142 36.747 80.2873 0 0.88767 0
tcay0002.o.01 2.0281 55.3415 36.1221 0.00237066 35.9813 54.881 0 0.894607 0
tcac0006.l.05 0.6196 58.6594 79.3482 0.00184865 89.9659 55.0225 0 0.87015 0
1RT152P21_B_H11 6.7256 249.384 206.973 0.00220763 207.928 249.909 1 0.939668 0
1RT118I08_C_E04 1.4562 72.9101 54.5135 0.00290583 55.1552 73.3351 0 0.903804 0
1RT85I16_C_E08 1.4703 60.9764 94.7938 0.00184865 90.179 68.7705 0 0.866266 0
1RT56A24_C_A12 1.3838 90.9632 68.8744 0.00362538 69.4175 92.5771 0 0.897224 0

Total number of rows: 9216

Table truncated, full table size 686 Kbytes.




Supplementary data files not provided
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