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GEO help: Mouse over screen elements for information. |
|
| Status |
Public on May 29, 2015 |
| Title |
Ileum_stem cell_rep2 |
| Sample type |
RNA |
| |
|
| Source name |
Ileum, stem cell
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Fetal
cell type: Ileum, stem cell
|
| Extracted molecule |
total RNA |
| Extraction protocol |
PicoPure® RNA Isolation Kit (life technologies), RNeasy Mini Kit (Qiagen)
|
| Label |
biotin
|
| Label protocol |
Encore® Biotin Module (Nugen)
|
| |
|
| Hybridization protocol |
GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
|
| Scan protocol |
GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
|
| Description |
Stem cell culture
|
| Data processing |
Expression console, Partek Genome Suite 6.6
probe group file: HuEx-1_0-st-v2.r2.pgf and meta-probeset file: HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
|
| |
|
| Submission date |
May 12, 2014 |
| Last update date |
May 29, 2015 |
| Contact name |
Frank McKeon |
| E-mail(s) |
mckeon.xian@gmail.com
|
| Phone |
8608372486
|
| Organization name |
University of Houston
|
| Department |
Biology and Biochemistry
|
| Street address |
3455 Cullen Blvd
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77004 |
| Country |
USA |
| |
|
| Platform ID |
GPL5175 |
| Series (2) |
| GSE57584 |
Cloning and Variation of Ground State Intestinal Stem Cells |
| GSE66749 |
Cloning and Variation of Ground State Intestinal Stem Cells Super [expression & SNP studies] |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
signal intensity (log2 value) RMA |
| Data table |
| ID_REF |
VALUE |
| 3881686 |
6.89378 |
| 2672712 |
6.89443 |
| 2842570 |
6.95147 |
| 3526544 |
3.71014 |
| 2902531 |
4.71926 |
| 2402942 |
7.07516 |
| 3382216 |
4.67255 |
| 3771800 |
8.21994 |
| 2427469 |
5.15558 |
| 2392945 |
5.98685 |
| 2453006 |
5.3662 |
| 3552083 |
5.05438 |
| 3416651 |
4.03594 |
| 2562821 |
8.48308 |
| 3721851 |
6.8548 |
| 3442176 |
4.98419 |
| 2477438 |
3.85603 |
| 2926969 |
3.14666 |
| 3026969 |
7.08997 |
| 3796335 |
5.84268 |
Total number of rows: 22011
Table truncated, full table size 341 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM1385153_Ileum-2.CEL.gz |
20.3 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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