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Sample GSM1385160 Query DataSets for GSM1385160
Status Public on May 29, 2015
Title Duodenum_ALI_rep1
Sample type RNA
 
Source name Duodenum, ALI
Organism Homo sapiens
Characteristics tissue: Fetal
cell type: Duodenum, ALI
Extracted molecule total RNA
Extraction protocol PicoPure® RNA Isolation Kit (life technologies), RNeasy Mini Kit (Qiagen)
Label biotin
Label protocol Encore® Biotin Module (Nugen)
 
Hybridization protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChip® Hybridization, Wash, and Stain Kit (affymetrix)
Description Differentiation
Data processing Expression console, Partek Genome Suite 6.6
probe group file: HuEx-1_0-st-v2.r2.pgf and meta-probeset file: HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date May 12, 2014
Last update date May 29, 2015
Contact name Frank McKeon
E-mail(s) mckeon.xian@gmail.com
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (2)
GSE57584 Cloning and Variation of Ground State Intestinal Stem Cells
GSE66749 Cloning and Variation of Ground State Intestinal Stem Cells Super [expression & SNP studies]

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 7.13324
2672712 6.7759
2842570 6.42268
3526544 3.64782
2902531 5.09518
2402942 8.30247
3382216 7.01779
3771800 7.1161
2427469 7.69162
2392945 6.77456
2453006 7.92384
3552083 4.98656
3416651 4.0397
2562821 9.3904
3721851 6.62966
3442176 5.97328
2477438 4.26491
2926969 3.50957
3026969 6.38051
3796335 8.23257

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1385160_Duodenum-ALI-1.CEL.gz 21.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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