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Sample GSM146128 Query DataSets for GSM146128
Status Public on Nov 17, 2006
Title Caenorhabditis elegans small RNA sequences from wild type animals fed on sel-1 dsRNA producing bacteria
Sample type other
 
Source name sel-1 RNAi (feeding)
Organism Caenorhabditis elegans
Characteristics wild type animals fed on sel-1 dsRNA producing bacteria
Extracted molecule other
Extraction protocol n/a
Label n/a
Label protocol n/a
 
Hybridization protocol n/a
Scan protocol n/a
Description Raw data files (e.g. on Science Magazine website) may be preferred source for analysis.
Data processing Tags are complete (in most cases linker-containing) cDNA sequence. Value indicates number of instances in library.
FASTA nucleic acid file available in supplementary data link below.
 
Submission date Nov 17, 2006
Last update date Nov 17, 2006
Contact name Andrew Fire
E-mail(s) afire@stanford.edu
Phone 650-723-2885
Fax 650-724-9070
Organization name Stanford University
Department Pathology and Genetics
Street address 300 Pasteur Drive RML235 M5324
City Stanford
State/province CA
ZIP/Postal code 94305-5324
Country USA
 
Platform ID GPL4569
Series (1)
GSE6282 C. elegans small RNA sequences from wild type animals fed on sel-1 dsRNA producing bacteria

Data table header descriptions
ID_REF
VALUE number of instances in library

Data table
ID_REF VALUE
AAAAAAAAAAATTGATGGTGCCTACAGGTGGTTAAGAGGTACACCTTTTTTTCAGGTGCCTACGAT 1
AAAAGACCAGCCGCCGGTCAGGCTTTCGAGCAAGCACTCGTCACCTCAATCGTCATCTGCGTCTTGTCAAGCATTACTCCGCCGGCAG 1
AAACGCTGGCCGCTGAGCCGGAAACAATCTAGCCAGTACCGAGCCTATCAGCGCAATCAGGAAAAGTAATTTCTAGACAGTACAAGACAGTGAGCCAATGG 1
AAAGAAGTCATCGAAGCGCCCACCTGTCTCCGCGGACAGTACTCGCCGAACACCGCCGCCAGCGCGCGTTCGGTGTCGGTGCGCGGTCGGTCGACGAC 1
AAAGGCGTCGTTGTTGACGGTCGCTACTTCTACTTCTACCTCGAGCGGGTTTACGCACCTCCACGCACGCCCGCGCCAAACTCGCCAAACTCGCGTTCGCCGTAGGGACTTTCGGCCCTAG 1
AAATTGCGCCTGCTGGCGCGTGTCGGGTCCTGCCCTACCCAACCAGGTCCGCCCGAAGTCCGAGCAGGTTACGCCGGCGTAGGTGATGCTGACATCGGGTCCACTAG 1
AACTCTGACTTTCCGGACCCGGTGGTGCCGATCAGCATCCCGTGTGGGCCGGCGCCGAACTCCGCGCCCTCCTTGATGTCGAGGTAGATGACATCACCGGT 1
AAGCACCTGAAATATCACTATTCTGTTTTTCGCCCTGTAGGCACCATCAAT 1
AAGGCGGTACTTTTCGGTCCGGCTGTCGAGAGAATTGCCGAGAACATACTCGAGGGACTTTGTTCGTGAGCGTCCTCGACTGGCCGGTCGCCAACGTCAACCCGCAGGTCGATTTTG 1
AATACCCTGTAGATCGAGCTGTGTGTCTGTAGGCACCATCAAT 1
AATCGTAGCGACCTGAAATAGAGTATACGTTCAGTACGGACTAACTGTAGGCACCATCAT 1
AATCGTAGGCACCTCGAAAATTTAAATAAAACCTTACGAAAACCCGCCCCTTACCTTAAAAAGGTTTTTAACTGGTTTAAGGGCCTAACCCAA 1
AATCGTAGGCACCTGAAAATGAGATCGTTCAGTACGGCAATCTGTAGGCACCATCAAT 1
AATCGTAGGCACCTGAAACTCTTTCTCGATTTGGTGGTTGGCTGTAGGCACCATCAAT 1
AATCGTAGGCACCTGAAAGAACAGTATCGGGATCAGGCTCCTAGTAGGCGACCACTCAATA 1
AATCGTAGGCACCTGAAAGAACATATCGGGATCAGCTCCTGTAGGCACCATCAAT 1
AATCGTAGGCACCTGAAAGCATCGGTGGTTCAGTGGTAGAATCTGTAGGCACCATCAAT 1
AATCGTAGGCACCTGAAATAAGTGAATGCTTTGCCACAGTCCTGTAGGCACCATCAAT 1
AATCGTAGGCACCTGAAATACTCACCGGGTGGAAACTAGCAGTCTGTAGGCACCATCAAT 1
AATCGTAGGCACCTGAAATCCCTGAGACCTCAAGTGTGACTGTAGGCACCATCA 1

Total number of rows: 89917

Table truncated, full table size 5725 Kbytes.




Supplementary file Size Download File type/resource
GSM146128.txt.gz 4.0 Mb (ftp)(http) TXT

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