|
Status |
Public on Nov 06, 2014 |
Title |
36_uRCC |
Sample type |
genomic |
|
|
Channel 1 |
Source name |
Renal Cells Tumor
|
Organism |
Homo sapiens |
Characteristics |
cell type: unclassified renal cell carcinoma (uRCC) rcc type: unclassified
|
Extracted molecule |
genomic DNA |
Extraction protocol |
DNA was extracted from fresh, frozen or formol fixed-paraffin embedded fragments using Qiamp DNA mini kit.
|
Label |
Cy5
|
Label protocol |
DNA was labeled with the sureTag labeling kit accirding the agilent protocol
|
|
|
Channel 2 |
Source name |
commercial reference DNA from cell lines
|
Organism |
Homo sapiens |
Characteristics |
sample type: Male/Female DNA control provided in SureTag Labeling Kit
|
Extracted molecule |
genomic DNA |
Extraction protocol |
DNA was extracted from fresh, frozen or formol fixed-paraffin embedded fragments using Qiamp DNA mini kit.
|
Label |
Cy3
|
Label protocol |
DNA was labeled with the sureTag labeling kit accirding the agilent protocol
|
|
|
|
Hybridization protocol |
DNA was hybridized with the hybridization kit according the Agilent protocol
|
Scan protocol |
We used a Surescan provided by Agilent and controled by SureScan Software
|
Data processing |
the data was processed on Cytogenomics 2.9.1.3 using the Default Analysis Method - CGH v2 proposed by Agilent
|
|
|
Submission date |
Nov 05, 2014 |
Last update date |
Nov 06, 2014 |
Contact name |
Thibault FABAS |
Organization name |
CHU Nice
|
Lab |
Génétiques des Tumeurs Solides
|
Street address |
28 av Valombrose
|
City |
NICE |
ZIP/Postal code |
06107 |
Country |
France |
|
|
Platform ID |
GPL17964 |
Series (2) |
GSE63000 |
Renal cells Carcinoma (RCC) Genome variation profiling by genome tiling array with Agilent CGH array |
GSE63003 |
Renal cells Carcinoma (RCC) Genome variation profiling by genome tiling array |
|