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Sample GSM1540962 Query DataSets for GSM1540962
Status Public on Mar 31, 2015
Title IEL gd
Sample type SAGE
Anchor NlaIII
Tag Count 91055
Tag Length 10
Source name Intestinal TCRγδ IEL
Organism Mus musculus
Characteristics cell type: Intestinal TCRγδ IEL
strain: C57BL/6
Treatment protocol IEL were isolated from murine gut as described in Shires et al (2001) Immunity, 15, 419-34
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with trizol and processed as in the supplied protocol (see also Shires et al (2001), Immunity, 15, 419-34
Complete SAGE protocol provided in Series supplementary file Hayday_SAGE_Protocol_Nov 2001.pdf
Data processing supplementary files include data normalized to 100,000 tags
Analysis was performed using SAGE300 and eSAGE software
Submission date Nov 07, 2014
Last update date Mar 31, 2015
Contact name Lucie Abeler-Dörner
Organization name King's College London
Department Immunobiology
Lab Hayday
Street address Great Maze Pond
City London
ZIP/Postal code SE1 9RT
Country United Kingdom
Platform ID GPL11
Series (1)
GSE63090 Gene expression of conventional and unconventional T cell subsets

Supplementary file Size Download File type/resource
GSM1540962_Hayday_SAGE_library_2.txt.gz 48.8 Kb (ftp)(http) TXT
Processed data provided as supplementary file

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