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Sample GSM160343 Query DataSets for GSM160343
Status Public on Jan 01, 2008
Title Prostate tumor patient 1 (HG-U133A 2.0 Array)
Sample type RNA
Source name Adenocarcinoma (NOS) of the prostate
Organism Homo sapiens
Characteristics race: Caucasian
smoking status: Past
gleason sum: 7
pt stage: 3
extraprostatic extension: Focal
perineural invasion: Yes
seminal vesicle invasion: No
are surgical margins involved: Unknown
angio lymphatic invasion: No
Extracted molecule total RNA
Extraction protocol TRIzol
Label biotin
Label protocol Standard Affy protocol
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Race: Caucasian, Smoking Status: Past, Gleason Sum: 7, PT Stage: 3, Extraprostatic Extension: Focal, Perineural Invasion: Yes, Seminal vesicle invasion: No, Are Surgical margins involved: Unknown, Angio lymphatic invasion: No
Data processing MAS5
Submission date Feb 05, 2007
Last update date Apr 16, 2015
Contact name Robert Scott Hudson
Organization name NIH
Department NCI
Lab The Laboratory of Human Carcinogenesis
Street address National Cancer Institute Room Blgd.37/3044
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
Platform ID GPL571
Series (2)
GSE6956 Tumor Immunobiological Differences in Prostate Cancer between African-American and European-American Men
GSE7055 Expression of microRNAs and Protein-coding Genes Associated with Perineural Invasion in Prostate Cancer

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
1007_s_at 2740.056233 P
1053_at 313.386498 P
117_at 69.24458395 P
121_at 450.6023032 P
1255_g_at 22.95722098 A
1294_at 542.6188772 P
1316_at 51.26525186 M
1320_at 51.6217652 A
1405_i_at 224.3306678 P
1431_at 133.4564528 P
1438_at 310.0529877 P
1487_at 298.661823 P
1494_f_at 64.03069049 A
1598_g_at 1594.973152 P
160020_at 306.6861848 P
1729_at 580.7889179 P
1773_at 180.4629471 P
177_at 42.48896695 M
179_at 438.7742324 P
1861_at 348.7554235 P

Total number of rows: 22277

Table truncated, full table size 540 Kbytes.

Supplementary file Size Download File type/resource
GSM160343.CEL.gz 2.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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