 |
 |
GEO help: Mouse over screen elements for information. |
|
Status |
Public on Jan 01, 2008 |
Title |
Prostate tumor patient 21 (HG-U133A 2.0 Array) |
Sample type |
RNA |
|
|
Source name |
Adenocarcinoma (NOS) of the prostate
|
Organism |
Homo sapiens |
Characteristics |
race: African American smoking status: Unknown gleason sum: 7 pt stage: 3 extraprostatic extension: Multifocal perineural invasion: Yes seminal vesicle invasion: Yes are surgical margins involved: Tumor focal at margin angio lymphatic invasion: No
|
Extracted molecule |
total RNA |
Extraction protocol |
TRIzol
|
Label |
biotin
|
Label protocol |
Standard Affy protocol
|
|
|
Hybridization protocol |
Standard Affy protocol
|
Scan protocol |
Standard Affy protocol
|
Description |
Race: African American, Smoking Status: Unknown, Gleason Sum: 7, PT Stage: 3, Extraprostatic Extension: Multifocal, Perineural Invasion: Yes, Seminal vesicle invasion: Yes, Are Surgical margins involved: Tumor focal at margin, Angio lymphatic invasion: No
|
Data processing |
MAS5
|
|
|
Submission date |
Feb 05, 2007 |
Last update date |
Apr 16, 2015 |
Contact name |
Robert Scott Hudson |
Organization name |
NIH
|
Department |
NCI
|
Lab |
The Laboratory of Human Carcinogenesis
|
Street address |
National Cancer Institute Room Blgd.37/3044
|
City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20852 |
Country |
USA |
|
|
Platform ID |
GPL571 |
Series (2) |
GSE6956 |
Tumor Immunobiological Differences in Prostate Cancer between African-American and European-American Men |
GSE7055 |
Expression of microRNAs and Protein-coding Genes Associated with Perineural Invasion in Prostate Cancer |
|
Data table header descriptions |
ID_REF |
Affy ID |
VALUE |
MAS5-calculated Signal intensity |
ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
Data table |
ID_REF |
VALUE |
ABS_CALL |
1007_s_at |
2687.255247 |
P |
1053_at |
370.373598 |
P |
117_at |
64.41949583 |
P |
121_at |
389.9732785 |
P |
1255_g_at |
6.411324263 |
A |
1294_at |
527.8199516 |
P |
1316_at |
75.80375676 |
P |
1320_at |
34.43870377 |
A |
1405_i_at |
340.5150447 |
P |
1431_at |
110.3883579 |
P |
1438_at |
291.2668938 |
P |
1487_at |
403.8802446 |
P |
1494_f_at |
91.36540096 |
P |
1598_g_at |
1880.12967 |
P |
160020_at |
318.296029 |
P |
1729_at |
754.919394 |
P |
1773_at |
112.9849922 |
A |
177_at |
44.68240141 |
A |
179_at |
299.4939575 |
A |
1861_at |
292.9501578 |
P |
Total number of rows: 22277
Table truncated, full table size 540 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GSM160362.CEL.gz |
2.2 Mb |
(ftp)(http) |
CEL |
Processed data included within Sample table |
|
|
|
|
 |