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Sample GSM160362 Query DataSets for GSM160362
Status Public on Jan 01, 2008
Title Prostate tumor patient 21 (HG-U133A 2.0 Array)
Sample type RNA
Source name Adenocarcinoma (NOS) of the prostate
Organism Homo sapiens
Characteristics race: African American
smoking status: Unknown
gleason sum: 7
pt stage: 3
extraprostatic extension: Multifocal
perineural invasion: Yes
seminal vesicle invasion: Yes
are surgical margins involved: Tumor focal at margin
angio lymphatic invasion: No
Extracted molecule total RNA
Extraction protocol TRIzol
Label biotin
Label protocol Standard Affy protocol
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Race: African American, Smoking Status: Unknown, Gleason Sum: 7, PT Stage: 3, Extraprostatic Extension: Multifocal, Perineural Invasion: Yes, Seminal vesicle invasion: Yes, Are Surgical margins involved: Tumor focal at margin, Angio lymphatic invasion: No
Data processing MAS5
Submission date Feb 05, 2007
Last update date Apr 16, 2015
Contact name Robert Scott Hudson
Organization name NIH
Department NCI
Lab The Laboratory of Human Carcinogenesis
Street address National Cancer Institute Room Blgd.37/3044
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
Platform ID GPL571
Series (2)
GSE6956 Tumor Immunobiological Differences in Prostate Cancer between African-American and European-American Men
GSE7055 Expression of microRNAs and Protein-coding Genes Associated with Perineural Invasion in Prostate Cancer

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
1007_s_at 2687.255247 P
1053_at 370.373598 P
117_at 64.41949583 P
121_at 389.9732785 P
1255_g_at 6.411324263 A
1294_at 527.8199516 P
1316_at 75.80375676 P
1320_at 34.43870377 A
1405_i_at 340.5150447 P
1431_at 110.3883579 P
1438_at 291.2668938 P
1487_at 403.8802446 P
1494_f_at 91.36540096 P
1598_g_at 1880.12967 P
160020_at 318.296029 P
1729_at 754.919394 P
1773_at 112.9849922 A
177_at 44.68240141 A
179_at 299.4939575 A
1861_at 292.9501578 P

Total number of rows: 22277

Table truncated, full table size 540 Kbytes.

Supplementary file Size Download File type/resource
GSM160362.CEL.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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