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Sample GSM160385 Query DataSets for GSM160385
Status Public on Jan 01, 2008
Title Prostate tumor patient 44 (HG-U133A 2.0 Array)
Sample type RNA
Source name Adenocarcinoma (NOS) of the prostate
Organism Homo sapiens
Characteristics race: Caucasian
smoking status: Unknown
gleason sum: 7
pt stage: 3
extraprostatic extension: Focal
perineural invasion: Yes
seminal vesicle invasion: No
are surgical margins involved: All surgical margins are free of tumor
angio lymphatic invasion: No
Extracted molecule total RNA
Extraction protocol TRIzol
Label biotin
Label protocol Standard Affy protocol
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Race: Caucasian, Smoking Status: Unknown, Gleason Sum: 7, PT Stage: 3, Extraprostatic Extension: Focal, Perineural Invasion: Yes, Seminal vesicle invasion: No, Are Surgical margins involved: All surgical margins are free of tumor, Angio lymphatic invasion: No
Data processing MAS5
Submission date Feb 05, 2007
Last update date Apr 16, 2015
Contact name Robert Scott Hudson
Organization name NIH
Department NCI
Lab The Laboratory of Human Carcinogenesis
Street address National Cancer Institute Room Blgd.37/3044
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
Platform ID GPL571
Series (2)
GSE6956 Tumor Immunobiological Differences in Prostate Cancer between African-American and European-American Men
GSE7055 Expression of microRNAs and Protein-coding Genes Associated with Perineural Invasion in Prostate Cancer

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
1007_s_at 2018.051335 P
1053_at 168.1647786 P
117_at 9.395865383 A
121_at 436.5217023 P
1255_g_at 23.5995703 A
1294_at 560.1468052 P
1316_at 28.52528762 A
1320_at 100.3240066 M
1405_i_at 525.8887973 P
1431_at 75.33086841 P
1438_at 134.091871 P
1487_at 286.6104556 M
1494_f_at 74.92493549 P
1598_g_at 1948.183286 P
160020_at 365.659434 P
1729_at 570.9428647 P
1773_at 169.7961114 P
177_at 81.11871154 P
179_at 316.1383235 A
1861_at 352.7985982 P

Total number of rows: 22277

Table truncated, full table size 540 Kbytes.

Supplementary file Size Download File type/resource
GSM160385.CEL.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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