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Sample GSM1614646 Query DataSets for GSM1614646
Status Public on May 29, 2015
Title Ileum_ALI_rep3
Sample type RNA
 
Source name Ileum, ALI
Organism Homo sapiens
Characteristics tissue: Fetal ilial tissue
Growth protocol Stem cells are differentiated by air-liquid interface method.
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit (Qiagen)
Label biotin
Label protocol EncoreĀ® Biotin Module (Nugen)
 
Hybridization protocol GeneChipĀ® Hybridization, Wash, and Stain Kit (affymetrix)
Scan protocol GeneChipĀ® Hybridization, Wash, and Stain Kit (affymetrix)
Description Gene expression data from air-liquid interface differentiation
Data processing Expression console, Partek Genome Suite 6.6
HuEx-1_0-st-v2.r2.pgf
HuEx-1_0-st-v2.r2.dt1.hg18.core.mps
 
Submission date Feb 19, 2015
Last update date May 30, 2015
Contact name Frank McKeon
E-mail(s) mckeon.xian@gmail.com
Phone 8608372486
Organization name University of Houston
Department Biology and Biochemistry
Street address 3455 Cullen Blvd
City Houston
State/province TX
ZIP/Postal code 77004
Country USA
 
Platform ID GPL5175
Series (2)
GSE66115 Human ileum stem cell differentiation by air-liquid interface
GSE66749 Cloning and Variation of Ground State Intestinal Stem Cells Super [expression & SNP studies]

Data table header descriptions
ID_REF
VALUE signal intensity (log2 value) RMA

Data table
ID_REF VALUE
3881686 7.12164
2672712 5.98423
2842570 6.90318
3526544 4.4305
2902531 5.53972
2402942 7.49016
3382216 5.73534
3771800 7.73509
2427469 8.2798
2392945 5.58907
2453006 8.37738
3552083 4.4196
3416651 3.5313
2562821 8.72759
3721851 6.8605
3442176 5.91006
2477438 4.93356
2926969 2.72212
3026969 6.51843
3796335 7.68026

Total number of rows: 22011

Table truncated, full table size 341 Kbytes.




Supplementary file Size Download File type/resource
GSM1614646_Ileum-ALI-3.CEL.gz 19.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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