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Status
Public on Jul 25, 2002
Title
Adult mouse heart
Sample type
SAGE
Anchor
NlaIII
Tag Count
84192
Tag Length
10
Source name
Hearts, 3-month old female C57BL/6 mice
Organism
Mus musculus
Extracted molecule
total RNA
Description
A quantitative and validated SAGE transcriptome reference for adult mouse heart. Adult mouse heart, 3-month old female C57BL/6 mice. Total number of 88,860 SAGE tags sequenced. 84,192 SAGE tags analyzed after clean-up (extraction of poly(A) tags, linker-generated tags, and tags originated from clones producing 4 tags or less). Keywords = mouse, heart
Submission date
May 23, 2002
Last update date
Nov 19, 2008
Contact name
Kenneth R. Boheler
E-mail(s)
bohelerk@grc.nia.nih.gov
Phone
410-558-8189
Fax
410-558-8150
URL
http://www.grc.nia.nih.gov/branches/lcs/mcu.htm
Organization name
National Institute on Aging, NIH
Department
GRC
Lab
Laboratory of Cardiovascular Science
Street address
5600 Nathan Shock Drive
City
Baltimore
State/province
MD
ZIP/Postal code
21224
Country
USA
Platform ID
GPL11
Series (1)
Data table header descriptions
TAG
Adult mouse heart
COUNT
Cleaned-up
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAC
2
23.76
AAAAAAAAAG
6
71.27
AAAAAAAAAT
5
59.39
AAAAAAACAT
1
11.88
AAAAAAAGCG
1
11.88
AAAAAAATAA
1
11.88
AAAAAAATAG
4
47.51
AAAAAACAAT
1
11.88
AAAAAACATC
1
11.88
AAAAAAGAAA
2
23.76
AAAAAAGACT
1
11.88
AAAAAAGTAC
1
11.88
AAAAAAGTTG
1
11.88
AAAAAATAAT
1
11.88
AAAAAATCAC
1
11.88
AAAAAATCAT
27
320.70
AAAAAATCGT
1
11.88
AAAAACAATC
1
11.88
AAAAACAGTG
5
59.39
AAAAACATCT
1
11.88
Total number of rows: 23941 Table truncated, full table size 446 Kbytes .Supplementary data files not provided
Processed data included within Sample table