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Sample GSM1743 Query DataSets for GSM1743
Status Public on Jun 07, 2002
Title CF-1 wild type 2mo ovary chip B
Sample type RNA
 
Source name wild type ovary from 2 month old CF-1 mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description Wild type ovary sample from 2 month old CF-1 mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date May 27, 2005
Contact name John H Nilson
E-mail(s) jhn@po.cwru.edu
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL76
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
TNFRII_at 5 4 20 20 18 0.25 0.3 1.3 42.4 A
MIP1-B_at 8 5 20 20 18 0.4 0.44 1.6 278.7 A
IL4_at 6 2 20 20 18 0.3 1.19 3 51.7 A
IL12_P40_at 6 9 20 20 18 0.3 0.31 0.7 -98.1 A
TNFa_at 4 4 20 20 19 0.2 0.3 1 2.4 A
TCRa_at 3 8 20 20 20 0.15 -1.75 0.4 -315.5 A
AFFX-BioB-5_at 11 3 20 20 18 0.55 2.14 3.7 528.2 P
AFFX-BioB-M_at 15 1 20 20 18 0.75 3.47 15 767.1 P
AFFX-BioB-3_at 12 3 20 20 20 0.6 2.12 4 761.3 P
AFFX-BioC-5_at 17 0 20 20 19 0.85 4.98 Undef 2098.5 P
AFFX-BioC-3_at 19 0 20 20 20 0.95 4.7 Undef 2408.6 P
AFFX-BioDn-5_at 17 1 20 20 20 0.85 5.36 17 2677.3 P
AFFX-BioDn-3_at 17 0 20 20 19 0.85 5.15 Undef 8343.8 P
AFFX-CreX-5_at 19 0 20 20 20 0.95 7.7 Undef 21109.7 P
AFFX-CreX-3_at 19 0 20 20 20 0.95 6.82 Undef 23439.8 P
AFFX-BioB-5_st 7 5 20 20 18 0.35 1.41 1.4 164.2 A
AFFX-BioB-M_st 6 7 20 20 18 0.3 0.72 0.9 57.9 A
AFFX-BioB-3_st 5 9 20 20 19 0.25 -0.52 0.6 -159.3 A
AFFX-BioC-5_st 4 8 20 20 20 0.2 -1.3 0.5 -697.3 A
AFFX-BioC-3_st 6 6 20 20 18 0.3 -0.43 1 -99.7 A

Total number of rows: 6592

Table truncated, full table size 318 Kbytes.




Supplementary data files not provided

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