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Sample GSM1755 Query DataSets for GSM1755
Status Public on Jun 07, 2002
Title CF/B6 transgenic 2mo ovary B
Sample type RNA
 
Source name Transgenic ovary from 2 month old CF-1xC57BL/6 F1 hybrid mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description Transgenic, cystic ovary sample from 2 month old CF-1xC57BL/6 F1 hybrid mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date Mar 17, 2006
Contact name John H Nilson
E-mail(s) jhn@po.cwru.edu
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL76
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 4 4 19 19 19 0.21 0.77 1 -112.7 A
IL10_at 7 4 20 20 17 0.35 1.33 1.8 123.8 A
GMCSF_at 5 4 20 20 19 0.25 0.62 1.3 -61 A
TNFRII_at 8 3 20 20 18 0.4 0.83 2.7 70.7 A
MIP1-B_at 7 4 20 20 18 0.35 0.29 1.8 113.2 A
IL4_at 7 3 20 20 19 0.35 0.69 2.3 90.9 A
IL12_P40_at 7 7 20 20 19 0.35 0.24 1 -210.2 A
TNFa_at 4 5 20 20 19 0.2 -0.87 0.8 -38.7 A
TCRa_at 3 8 20 20 20 0.15 -2.13 0.4 -396.3 A
AFFX-BioB-5_at 9 3 20 20 18 0.45 1.64 3 368.7 P
AFFX-BioB-M_at 10 1 20 20 18 0.5 2.34 10 456.6 P
AFFX-BioB-3_at 6 4 20 20 18 0.3 0.69 1.5 414.6 A
AFFX-BioC-5_at 16 0 20 20 19 0.8 4.39 Undef 1866 P
AFFX-BioC-3_at 15 0 20 20 20 0.75 3.6 Undef 1993.8 P
AFFX-BioDn-5_at 17 2 20 20 20 0.85 3.68 8.5 1629.3 P
AFFX-BioDn-3_at 16 1 20 20 19 0.8 4.79 16 6867.3 P
AFFX-CreX-5_at 20 0 20 20 20 1 7.89 Undef 21589.2 P
AFFX-CreX-3_at 20 0 20 20 20 1 7.64 Undef 28814.6 P
AFFX-BioB-5_st 8 5 20 20 18 0.4 1.4 1.6 246.1 A
AFFX-BioB-M_st 8 7 20 20 19 0.4 0.25 1.1 -20.6 A

Total number of rows: 6595

Table truncated, full table size 318 Kbytes.




Supplementary data files not provided
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