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Sample GSM182 Query DataSets for GSM182
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-1, tumor 1 (part 2 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=16
died=FALSE
tumorsize.cm=6
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625254 reuse=2 date=11-Dec-1999
 
Submission date Jul 19, 2001
Last update date Nov 02, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 139910 31329 108581
2 24105 31329 -7224
3 97995 31329 66666
4 30072 31329 -1257
5 82783 31329 51454
6 1653687 31329 1622358
7 13421 31329 -17908
8 31074 31329 -255
9 34056 31329 2727
10 98163 31329 66834
11 51591 31329 20262
12 169944 31329 138615
13 18007 31329 -13322
14 39811 31329 8482
15 22451 31329 -8878
16 15532 31329 -15797
17 608060 40401 567659
18 49632 40401 9231
19 46811 40401 6410
20 14442 40401 -25959

Total number of rows: 36864

Table truncated, full table size 859 Kbytes.




Supplementary data files not provided

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