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Sample GSM184 Query DataSets for GSM184
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-1, tumor 2 (part 2 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=16
died=FALSE
tumorsize.cm=6
sex=m
age=69
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625253 reuse=3 date=23-Feb-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 380738 42025 338713
2 59729 42025 17704
3 85160 42025 43135
4 32649 42025 -9376
5 63518 42025 21493
6 62558 42025 20533
7 16210 42025 -25815
8 101692 42025 59667
9 122929 42025 80904
10 80737 42025 38712
11 72666 42025 30641
12 389041 42025 347016
13 23223 42025 -18802
14 73785 42025 31760
15 21980 42025 -20045
16 4545 42025 -37480
17 1094500 38416 1056084
18 82486 38416 44070
19 46248 38416 7832
20 8373 38416 -30043

Total number of rows: 36864

Table truncated, full table size 877 Kbytes.




Supplementary data files not provided

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