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GEO accession:
Sample GSM188567
Query DataSets for GSM188567
Status
Public on Dec 25, 2007
Title
Knockout sham, biological rep1
Sample type
RNA
Source name
Heart
Organism
Mus musculus
Characteristics
Genotype: KO
Treatment protocol
Aortic banded vs sham
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Affmetrix standard protocol
Hybridization protocol
Affymetrix strandard protocol
Scan protocol
GeneChip Operating Software (GCOS) 1.4 was used for scanning
Description
Gene Expression data from KO Sham
Data processing
Data was analysed using GeneSpring 7.0, Agilent
Submission date
May 11, 2007
Last update date
Aug 28, 2018
Contact name
Sara Arab
Organization name
Toronto General Hospital
Department
Cardiology
Lab
M. Husain
Street address
610 University Avenue
City
Toronto
State/province
ONT
ZIP/Postal code
M5G 2M9
Country
Canada
Platform ID
GPL1261
Series (1)
GSE7781
Impaired heart function in Apelin gene-deficient mice
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
482.815
P
0.000445901
AFFX-BioB-M_at
711.951
P
4.42873e-05
AFFX-BioB-3_at
322.962
P
4.42873e-05
AFFX-BioC-5_at
919.887
P
7.00668e-05
AFFX-BioC-3_at
840.174
P
4.42873e-05
AFFX-BioDn-5_at
1154.42
P
4.42873e-05
AFFX-BioDn-3_at
4166.29
P
8.14279e-05
AFFX-CreX-5_at
10201.1
P
5.16732e-05
AFFX-CreX-3_at
9233.42
P
4.42873e-05
AFFX-DapX-5_at
0.840479
A
0.574038
AFFX-DapX-M_at
4.67267
A
0.425962
AFFX-DapX-3_at
10.0927
A
0.368438
AFFX-LysX-5_at
4.00584
A
0.300606
AFFX-LysX-M_at
6.17004
A
0.672921
AFFX-LysX-3_at
6.68792
A
0.227636
AFFX-PheX-5_at
1.07867
A
0.937071
AFFX-PheX-M_at
0.67539
A
0.921998
AFFX-PheX-3_at
4.57275
A
0.544587
AFFX-ThrX-5_at
2.17981
A
0.772364
AFFX-ThrX-M_at
7.87079
A
0.313723
Total number of rows:
45101
Table truncated, full table size
1375 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM188567.CEL.gz
3.8 Mb
(ftp)
(http)
CEL
GSM188567.CHP.gz
244.4 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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