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Sample GSM199 Query DataSets for GSM199
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-5, tumor 1 (part 2 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=I
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=42
died=FALSE
tumorsize.cm=3
sex=f
age=58
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180225 reuse=5 date=21-May-1999
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL10
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 20875 9604 11271
2 18770 9604 9166
3 9053 9604 -551
4 13614 9604 4010
5 7409 9604 -2195
6 34221 9604 24617
7 13654 9604 4050
8 15013 9604 5409
9 18132 9604 8528
10 7969 9604 -1635
11 6039 9604 -3565
12 22967 9604 13363
13 7412 9604 -2192
14 13720 9604 4116
15 8394 9604 -1210
16 7322 9604 -2282
17 115804 9216 106588
18 16381 9216 7165
19 10080 9216 864
20 8497 9216 -719

Total number of rows: 36864

Table truncated, full table size 825 Kbytes.




Supplementary data files not provided

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